| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_4052 |
|---|
| Symbol | |
|---|
| ID | 7118057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 4269852 |
|---|
| End bp | 4272371 |
|---|
| Gene Length | 2520 bp |
|---|
| Protein Length | 839 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643526771 |
|---|
| Product | TonB-dependent siderophore receptor |
|---|
| Protein accession | YP_002422780 |
|---|
| Protein GI | 218531964 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGGA TCGCGCTGGC CGGCGTGTCG GTCGCGGTGA TGGCTCAGGC GGCCGCGCAA
GCCGGCGAGG CGAAGCGGCC CCGCGGCCCC ACGATCCTGG CAGAAGCGCC GTTGGGGGGC
GCTCCCGTCC GGCTCGCCAT CCCGAAGGGT TCACTGGAGG CCGGCCTCGT CGCCTTCACC
GAGCAGGCCG GGGTCAAGCT GGTCTACCCG ACCGAGCTGA CGGCACGGCT CGAGACACCG
GGGCTCGCGG GCGAGTTCGC CCCGCTCGAT GCCCTGACCA AGCTCTTGGA CGGCACCGGC
CTCACCTATC GTCCGGCCGG CGCCTCGACC ATCACCTTGG TCAACCCGCG CTACGTCCAG
CTCGGCGCGG CGCCGGCCGG CGCGGTGACC CTCGATGAAC TGCACGTCGA GGGTCAGGCT
CAGGCCCGGG GCCGCGCCGC GGCCGCCGGC CTGCCGCCGC CCACCGGGAC GGTCGGGCAG
CCGCCCGTGC CCTATGCCGG CGGTCAGGTC GGCTCGGGCG CCCGTGTCGG CTTGCTCGGC
AACCGCTCCG TCCTGAAGAC GCCCTTCAGC ATCACGGGCT ACACGGAGAA GCTGATCGCG
GATCAGCAGG CGGTGTCGCT CGCCGATGTC GTGCTGAACA ATTCGTCGGT GCGCAACGAC
GCCCCGCCCT ATAGCGAGCG CGATTCCTAC TTCATCCGCG GCTTCTCGGT CACCAATCTC
GACACCGCCT TCGACGGGCT GTTCTACCTC GCCAACCCGC GCCGCACCTT CACGGAGGGC
CTTGAGCGCG TCGAGGTGTT GCTCGGTCCC ACGGCGCTTC TGAGCGGCGG CACCGGCCGC
GTCGGCGGCA CGATCAACCT GATCCCCAAG CGCGCCTACG ACGAGCCGTT CGCCCGGCTC
ACCACGACCT ACATCAGCGA CGCGCAGATC TGGACCCATG CCGACCTCGG CCGCCGCTTC
GGCGAGTCCA AGGAATGGGG CGTGCGCTTC AACGGCGCCT ACCGCACCGG TGCCACGCCG
CTCGACAACA ACGCGATCGA GGTCGGTGTG GCGGCGCTGG GCCTCGACTA CCGCGGCGAC
CGGTTCCGGG CCTCGCTCGA CATGACCCAC TCGACCCAGA ACGTCACGGC GCCGACCTCG
CTGTTCAATG CGGTCGCGCC CGGTATTCAG ATTCCCCGTG CCCCGAACAA CCGGACCAAC
ACCGCGAATC CGTTCGAGTA CAACGACAGC CGCTACGGCA TGATCACGGG CCGGGCCGAG
TACGACGTCC TGCCTGACAC GACGGTCTAC ATCGCCGGCG GCGCCAGCCG CTACAACGAA
GACTTCCTCA CCTCGAACTA CCGCGTGACG AGCGTGACCG GGCAGGCGAC CAACCTACTC
GCGATCCAGC CCCAGGAAAT TCAGGGGCTC ACCGGCGAGG TGGGCTTGCG CACCCGCTTC
AGCACCGGCT TCCTCAATCA TCAGGTGAAC ATCGCGGCCG TCGAGGCGAA CAACAAGAAC
TTCCGCAGCG GCTTCGTCCC GCCCGTCTTC ACCCCTTACA CGATCAACAT CTACAATCCG
GTCTACCTGC CAACCGGATC GATTCCGACG ATCGGACTTC CCCGCTCCGC CGCGCAGCCG
CTCTTCGCCC AGCTTTCCGC GCGCAGCGTG GCGGTGGCCG ACACCCTGTC GTTCTTCGGC
GACGACCGCT TCCTGCTGAC GCTCGGTGGT CGCTATCAGG AGATCGACCA GCAGGGCTTC
GCCACCCGTC CGGGGCCGAC GCAGGGGCAG GTGACCTCGA ACTATCAGGA GGGCCGCTTC
AGCCCCGCCA TCACCTTCGT GCTGAGCCCG TTCGAGAACC TGTCCTTCTA CGGCAACTAC
ATCGAGTCGC TCGACCCGGT GGCCGCAGCG CCCCTCGCGG CGATCAATGC CAATGTCCTC
TTCCCGCCTG CCGTGGGGCG GCAGAAGGAA ATCGGCGTCA AGTACGATTT CGGCACCATT
GCCGCCACGG CCGCGCTATT CGAGATCGAG CTGCCGAACG CTTTCACCGA TCCCGGGACC
CGCATCTACT CGGTCAGCGG CCGTCAGCGG AACCGCGGCG TTGAGCTGAA CGTGTTCGGC
GAGGTCGTCC CGGGCCTGCG GCTGCTCGGC GGCGTCACCT TCATCGACGC GGAACTGGTC
AACACGCCGG GAGGACAGTT CAACGGGCGG GCCGCGCCCG GCGTGCCCGA CACGGCCTTC
AACCTCTACG CCGAGTACGA CCTGCCGCCG TGGCTGGCGC CGGGCCTGAC CCTGACCGGA
CGGGCGATCT ACACCAGCAG CATGTTCTAC GATCAGGCCA ACACCCAGTC GGTTCCGGAC
TGGACGCGCT TCGATGCCGG CCTGCGCTAC ACGACAGAGG GCGTGAACGG AAAGCCCGTC
GTGTTCCGCG CCCTCGTCCA GAACCTGCTC GACGACTCGT ACTGGGCCTC CGCCGCCCGC
GGCTTCCTCG CCGTCGGCGC GCCGCGCACC TTCATCGTCT CCGCCTCCGT CGATTTCTGA
|
|---|
| Protein sequence | MAGIALAGVS VAVMAQAAAQ AGEAKRPRGP TILAEAPLGG APVRLAIPKG SLEAGLVAFT
EQAGVKLVYP TELTARLETP GLAGEFAPLD ALTKLLDGTG LTYRPAGAST ITLVNPRYVQ
LGAAPAGAVT LDELHVEGQA QARGRAAAAG LPPPTGTVGQ PPVPYAGGQV GSGARVGLLG
NRSVLKTPFS ITGYTEKLIA DQQAVSLADV VLNNSSVRND APPYSERDSY FIRGFSVTNL
DTAFDGLFYL ANPRRTFTEG LERVEVLLGP TALLSGGTGR VGGTINLIPK RAYDEPFARL
TTTYISDAQI WTHADLGRRF GESKEWGVRF NGAYRTGATP LDNNAIEVGV AALGLDYRGD
RFRASLDMTH STQNVTAPTS LFNAVAPGIQ IPRAPNNRTN TANPFEYNDS RYGMITGRAE
YDVLPDTTVY IAGGASRYNE DFLTSNYRVT SVTGQATNLL AIQPQEIQGL TGEVGLRTRF
STGFLNHQVN IAAVEANNKN FRSGFVPPVF TPYTINIYNP VYLPTGSIPT IGLPRSAAQP
LFAQLSARSV AVADTLSFFG DDRFLLTLGG RYQEIDQQGF ATRPGPTQGQ VTSNYQEGRF
SPAITFVLSP FENLSFYGNY IESLDPVAAA PLAAINANVL FPPAVGRQKE IGVKYDFGTI
AATAALFEIE LPNAFTDPGT RIYSVSGRQR NRGVELNVFG EVVPGLRLLG GVTFIDAELV
NTPGGQFNGR AAPGVPDTAF NLYAEYDLPP WLAPGLTLTG RAIYTSSMFY DQANTQSVPD
WTRFDAGLRY TTEGVNGKPV VFRALVQNLL DDSYWASAAR GFLAVGAPRT FIVSASVDF
|
|---|
| |