Gene Mchl_4028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4028 
Symbol 
ID7118033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4239008 
End bp4239844 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content65% 
IMG OID643526747 
ProductSubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_002422756 
Protein GI218531940 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.662148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCAC CGATACTTGG GGTGATCGCC TGCCTCGCGC TGGCTCAGAC GCCGGCCGAG 
GCAGCCGGCA AGCAGGTTCG GCTCGCCTAC GTGGAATGGG CCGACGCCGT GGTCGCCACC
AACATCCTCA AGCTCGTCCT TGAGGAAAAA GGCTACCAAG TGAAGACGAT TCCGCTCGCG
GCGGCGGCCA TGTGGCAATC CGTGGCGACC GGCGACGCGG ATGCGAGCGT CGCGGCCTGG
CTCCCCGTCA CGCAGGGCGC CTATTATGAA AAACTGAAGA ACCGCATCGA CCTGATCGGC
CCGAACGTCA CAGGGGCCCG GATCGGCTGG GCCGTGCCCG CCACGTCGCC CCTCAACTCG
ATCGAGGATC TGGCGACCAA GGCCTCCGAG GTCGACGGCA AGGTGATCGG CATCGATCCC
GGCGCCGGCG TGATGAAGAG TTCCGAGGCG GCCATCAAGG CCTACGGCCT CAAGGTCAAG
CTGCTCGACG GCAGCGACGC CACGATGACC AGCGCGCTGA AGGATGCGGT ACGGCAGAAG
AAGGACGTGG TCGTCACGGC CTGGACGCCG CACTGGATGT TCGCGCGCTA CGACCTGAAA
TACTTGGCCG ACCCCAAGAA GAGCTTCGGT GAGGCCGAGA GCGTGAACAC GCTGGCCCGC
AAGGGGCTCA AGGACGACCT GCCCGAGGTC TACGCGATCC TCCAGAAGTT CAAGCTCACC
ATCAAGGACG AAGAAGCCGT GATGGCGGAG AACGAGGAAA AGGGCGCCAA GCCCGAGGCG
ACCGCCGCGA AGTGGATCGC GCAGAATCGC GCGACGGTCG ATGGCTGGCT GAAGTGA
 
Protein sequence
MRAPILGVIA CLALAQTPAE AAGKQVRLAY VEWADAVVAT NILKLVLEEK GYQVKTIPLA 
AAAMWQSVAT GDADASVAAW LPVTQGAYYE KLKNRIDLIG PNVTGARIGW AVPATSPLNS
IEDLATKASE VDGKVIGIDP GAGVMKSSEA AIKAYGLKVK LLDGSDATMT SALKDAVRQK
KDVVVTAWTP HWMFARYDLK YLADPKKSFG EAESVNTLAR KGLKDDLPEV YAILQKFKLT
IKDEEAVMAE NEEKGAKPEA TAAKWIAQNR ATVDGWLK