| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_3995 |
|---|
| Symbol | |
|---|
| ID | 7117194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 4207024 |
|---|
| End bp | 4207779 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643526719 |
|---|
| Product | Integrase catalytic region |
|---|
| Protein accession | YP_002422728 |
|---|
| Protein GI | 218531912 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.637652 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCACCC TGCCGGCCGA CGAGGATGCA CTGACCCGAG CCATCGTCGC CTTAGCGTCC
GAGTATGGGC GCTACGGCTA CCGCCGCGTG ACGGCTCTGC TGCAAGCAGA CGGGTGGCGG
GTGGGCAAGG ATCGGGTTCA GCGCATCTGG CGTCGCGAGG GGCTGAAGGT CCCCAGCCGA
CATAGACCCC GCCGCAGCCG GCTCTGGTTG AACGACGGCT CGTGCGTGCG GCTGCGGCCG
CTTCACCGCA ACCACGTCTG GAGCTTCGAC TTCGTGCAGG CACAGACCCA TGACGGGCGC
TCTCTACGCA TCCTGACGCT GATCGACGAG CACAGCCGGG CGTGCCTGGC GTTGAAGGTG
GCGCGGCGCA TCAACAGCGT CGGCGTGATC GAGGCGCTAG CAGAGGCGAT ATGCCTGCAT
GGCATTCCAG AGCACATCCG CTGCGACAAC GGCCCTGAGA TGATCTCGAA GGCGTTGCGC
AAGTGGGTCG CAAAGACCGG ATCGCAGATC CAGTACATCG CCCCGGGCTC GCCGTGGGAG
AACGGGTACT GTGAGAGCTT CAACGGCAAG CTTCGTGACG AGTGCCTACG CCAGGGGATT
TTCTACTCGC TGAGAGAAGC ACAGGTCGTG ATTGGCCTAT GGCAGAACAC ATACAACCGT
GTCCGGCCGC ATTCGTCGCT GGGCTACCGG CCGCCCGCGC CTGTCAGCTT CCCGGATCGG
GCCTACCGGC TACCCATGGC CACTACCATG CAGTAG
|
|---|
| Protein sequence | MPTLPADEDA LTRAIVALAS EYGRYGYRRV TALLQADGWR VGKDRVQRIW RREGLKVPSR
HRPRRSRLWL NDGSCVRLRP LHRNHVWSFD FVQAQTHDGR SLRILTLIDE HSRACLALKV
ARRINSVGVI EALAEAICLH GIPEHIRCDN GPEMISKALR KWVAKTGSQI QYIAPGSPWE
NGYCESFNGK LRDECLRQGI FYSLREAQVV IGLWQNTYNR VRPHSSLGYR PPAPVSFPDR
AYRLPMATTM Q
|
|---|
| |