Gene Mchl_3930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3930 
Symbol 
ID7117128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4124165 
End bp4125214 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content73% 
IMG OID643526660 
Product4-hydroxythreonine-4-phosphate dehydrogenase 
Protein accessionYP_002422670 
Protein GI218531854 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1995] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.772102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCCG ACGACAGACC GCTCGCCCTC ACCCTCGGCG ATCCCTCCGG GATCGGGCCG 
GAGATCGCGC TCGCCGCGTG GCAGCTGCGG AGTGAGCGGG GGGTGCCGCC GTTCCAGCTC
ATCGGCGACC CCGAATTCCT GGAAGCCACC GCCTACCGGC TCGGCCTGTC GGTGCCCGTG
GCCGAGGTCG AGCCCGACGA CGCCTGCGAG GTGTTTCCCC GCGCCCTGCC GGTGCTGCCG
CTGCCGAGCG GCGCGAAGGT GATCGCCACG CCCGGCGCGC CGGATTCGGC CAATGCCGGC
GCGATCGTCG AGTCGATCAC CGCCGCCGTC GATCTGGTGC GCTCCGGCGC GGCCTCGGCT
GTGGTGACCA ACCCCATCGC CAAGTTCGTG CTGACGCGGG TCGGCTTCGC CCATCCGGGC
CATACCGAGT TTCTGGCCGC ACTCGCGGCA CGAGAGGGGC GTGAGCCGTC GCTGCCGGTG
ATGATGATCT GGAGCGACAC CCTCGCCGTG GTGCCGGTGA CGATCCACGT CGCCCTGCGC
CGCGTGCCCG AGTTGCTGAC GCAAGACTTG GTCGAGCGCA CCGCGCGCAT CGTCCACGCC
GACCTGCGCG CCCGCTTCGG CCTCGAACAT CCCCGCCTCG TCCTGTCGGG CCTCAACCCG
CATGCGGGCG AATCCGGCAC CATGGGCACC GAGGACCGCG ATGTGCTGGC GCCCGCCGTG
GCGGTGTTGC GCAGCGAGGG CATCGACATC CGCGGGCCGC TGCCGGCCGA CACCCTGTTC
CACGAGCGGG CGCGGGCGAC CTACGACGTG GCGCTCACCC CCACCCACGA TCAGGCGCTG
ATCCCGGTCA AGACGCTGGC CTTCGACGAG GGCGTGAACG TGACGCTGGG GCTGCCCTTC
GTGCGCACCT CGCCCGACCA CGGCACCGCC TTCGACATCG CCGGCAAGGG CCTCGCCAAG
CCGGACAGCC TGATCGCCGC CCTGCGGCTG GCGCATCGCC TCGCGCACCG CCCGGCGGAC
ACTGTCCTGC CCTTCCCCGC CCGCGCCTGA
 
Protein sequence
MASDDRPLAL TLGDPSGIGP EIALAAWQLR SERGVPPFQL IGDPEFLEAT AYRLGLSVPV 
AEVEPDDACE VFPRALPVLP LPSGAKVIAT PGAPDSANAG AIVESITAAV DLVRSGAASA
VVTNPIAKFV LTRVGFAHPG HTEFLAALAA REGREPSLPV MMIWSDTLAV VPVTIHVALR
RVPELLTQDL VERTARIVHA DLRARFGLEH PRLVLSGLNP HAGESGTMGT EDRDVLAPAV
AVLRSEGIDI RGPLPADTLF HERARATYDV ALTPTHDQAL IPVKTLAFDE GVNVTLGLPF
VRTSPDHGTA FDIAGKGLAK PDSLIAALRL AHRLAHRPAD TVLPFPARA