| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_3814 |
|---|
| Symbol | |
|---|
| ID | 7117009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 4026192 |
|---|
| End bp | 4027739 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643526549 |
|---|
| Product | PAS/PAC sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002422560 |
|---|
| Protein GI | 218531744 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCGA TGACGCTTTC CATGGCCGCG GCTGAGGCGA TTCAGGGGGG CGGCGAAGCG
CTGACGGCCG AGGACTTCCG GCAGACCCTC CACGAGGTCG GTGTCTGCAT CTGGTCGCTG
GACATTCCCA CCGGCCGCGT CAGCGCTTCG CAGACCTGCG GCTGCCTCTT CGGTATTCCA
ACCGAACGTC TGACGAGCTT TGCCGCGACC CAGGATCTGG TCCACCCGGA CGACCGCCAA
GCCCGCGCTC ACGCCATCGA GAGCGTGCTG CGTGACGGCG GCAGTTACGA GATCGAATAC
CGTGTCGTGC TGCCGAATGG GCGGGGTGGC TGGCTGCGCT CGCGAGGGCA GGTGCATCTC
GACGCCGAAG GCCGGCCCCA CCGGCACCGC GGGGTCGTCT TCAGCATCGA AGAGCAGAAG
CAGGTGGAGG CGGAGCTGCG CGCCCGCGAG GCCCATCTCC GCTCGATCCT CGACACGATG
CCGGAGGCGA TGGTGGTCAT CGACGAGGCG GGACTGATCC ACTCGTTCAA CCCGGCGGCC
GAACGCCTCT TCGGCTACGC GGCCGGCGAG GCGATCGGGC AGGACGTCCG CATCCTGATG
CCGGAGGCGA TGCAGGATGG ACATGCCGCC GACCTCGAGC GCTATCGGCA GACGCGCCAG
CGCCACATCA TCGGCACCAC GCGGTGCGTG ACGGGCCGAC GGCATGACGG CTCGACCTTT
CCGATGGAGC TGGCCATCGG CGAGATGCAT TCGGGCGAGC GGACCTTCTT CACCGGCTTC
ATCAACGACC TCACCGCGCA GCGGCGCACC GAGGCGCGGC TTCAGGAACT CCAGTCCGAG
CTGGGGCATG TCTCCCGCTT GAGCGCCATG GGCGAGATGG CGACGACGCT GGCCCACGAG
CTGAATCAGC CGCTCGGTGC CATCACCAAC TACACCAACG GCTGCCGCCG CCTCCTCGCC
CATCCCGACC CCGAGACCAT CGCCAGGGCA CAGGAGGTTC TCGACAAGGC GGCCGAGCAG
GCGCTGCGGG CCCGGCAGAT CATCGCCCGC CTGCGGGAGT TCGTCGCCCG TGGCGAGACG
GAGAAACGGG TCGAGCCGGT CGCGACGATG ATCGAGGAGG CCGGCGCCCT GACCCTGGCG
GCGGCCGGCG AGCAGGGCAT CACGGCCCAC GTCGTGCCGG ATCCGCGGGT CGGATCGGTC
TTGGTCGACC GGGTTCAGGT GCAGCAGGTT CTGGTCAACC TGATGCGCAA TGCCTGCGAG
GCGATGCAGC GCAGCAGCCG GCGCGAGCTG ACCGTCGCGA CGCGACGGGT TTCGCCGGAT
CTGGCCGAGG TCGCGGTGTC GGATACCGGC CCCGGTATCG CCGAGGAGGT CGCCGACCGG
CTGTTCCAGC CCTTCGTCAC CACCAAGGAG GCCGGGATGG GCGTCGGCCT CTCGATTTCC
CGCACCATCA TCGAGGCGCA TGGCGGCCGC CTCTGGGTCG AGCCCAACGC CGCGGGCGGG
GCGACCTTCC GGCTGACCCT GCCGACCGCA CCCGAGAGAG GTCGGTAA
|
|---|
| Protein sequence | MESMTLSMAA AEAIQGGGEA LTAEDFRQTL HEVGVCIWSL DIPTGRVSAS QTCGCLFGIP
TERLTSFAAT QDLVHPDDRQ ARAHAIESVL RDGGSYEIEY RVVLPNGRGG WLRSRGQVHL
DAEGRPHRHR GVVFSIEEQK QVEAELRARE AHLRSILDTM PEAMVVIDEA GLIHSFNPAA
ERLFGYAAGE AIGQDVRILM PEAMQDGHAA DLERYRQTRQ RHIIGTTRCV TGRRHDGSTF
PMELAIGEMH SGERTFFTGF INDLTAQRRT EARLQELQSE LGHVSRLSAM GEMATTLAHE
LNQPLGAITN YTNGCRRLLA HPDPETIARA QEVLDKAAEQ ALRARQIIAR LREFVARGET
EKRVEPVATM IEEAGALTLA AAGEQGITAH VVPDPRVGSV LVDRVQVQQV LVNLMRNACE
AMQRSSRREL TVATRRVSPD LAEVAVSDTG PGIAEEVADR LFQPFVTTKE AGMGVGLSIS
RTIIEAHGGR LWVEPNAAGG ATFRLTLPTA PERGR
|
|---|
| |