Gene Mchl_3750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3750 
Symbol 
ID7115411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3961460 
End bp3963052 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content67% 
IMG OID643526485 
Productphytoene desaturase 
Protein accessionYP_002422497 
Protein GI218531681 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID[TIGR02734] phytoene desaturase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGCAGT CGCGGGAAGG TTTGCGTACC CTGTCGGGCC GCCGCACAAT CGTCGTCGGG 
GCCGGCCCCG GCGGGCTTGC AACGGCGCTG CTCCTGGCCA AGGCCGGACT GCACGTCACG
CTGATCGAGA AGGACGCCCA AGTCGGCGGG CGCACCAAGA CCGTGGAGGC GCCGGGCGGC
TACCGCTTCG ACATCGGCCC GACCTTCTTC CTCTATCCGC AGATCCTCGC CGACATCTTC
GAATCCTGCG GCGAGCGTCT GGAGGACCAT GTCCGGCTGG AGCGGCTCGA CCCGCAATAC
AATCTCGTCT TCGAGGGTGA GGGCGGCATT TCGGGGCAGA TCCGCGCCAC CGGCGACGTG
CCGCGGCTGA AGGCCGAGAT CGCCCGCCTC GCCCCCGCCG ATGCCGGGAA CGTCGAAAAA
TTCTTCGAAG AGAACCGGAC CAAGCTGAAC TACTTCAAGC CGGTGCTGGA ACAGCCCTTC
GACAACATCC TGTCGATGGC GAGCCCGGCG ATGCTGGCCG CCCTCCCCCA TCTCCATCCC
GGCCGCAGCG TGGACCGGGA TCTCAAGCGC TATTTCGCCG ACCCGCGGGT GCGCCTCGCC
TTCTCGTTCC AGACCAAATA TCTCGGGATG AGCCCCTTCC GCTGCCCGAG CCTGTTCACG
ATCCTCTCGT TCCTCGAATA CGAGCACGGG GTCTACCACC CGGTCGGCGG CTGCGGCGCG
GTCTCGGAGG CGATGGCGGG GCTGGCCCGC CGCATGGGCG TCGACATCCG CCTCGGGCAA
TCGGTCGAGC GGATCCTGTT CGAGGGCAAG CGCGCCACCG GCGTGGTCGT CGACGGCGAG
ACGCTGAAGG CCGATGCGGT CGTCGTGAAC GGCGACTTCG CCAAGGTGAT CCGCGATCTC
GTGCCGGAGG AGCGGCGCCC GCGTTGGCGT GACGCCAAGA TCGGCAAGGC GCGGCTCTCC
TGCTCGACCT ACATGCTCTA TCTCGGCATC GAGGGTAAAA TGCCCGAGAG CCTGGGCCAC
CACACCATCC TGCTGGCCAA GGAATACGAG CGCAACATCA AGGAGATCAC CGGCGGCACG
CTGCCGATGG AGCCTTCGAT CTACGTGCAG CATGCCGGCT TCACCGATGG CGGTATGGCG
CCGCCCGGCC ACACCGCCCT CTACGTGCTG GTGCCGGTGC CGAACCTGAA GGCGGGCATC
GATTGGGAGA CGGTCGGCCC GACCTACCGC AAGCTGATTC TGGAGCGCTT GAAGCTCCTC
GGCCTTCCCG ACATCGAGAG CCGCATCCGT TACGAGCGCG TGGTCGATCC CCGCGACTGG
CGCGACGAGT TCGCGGTGCA TGAGGGCGCG ACCTTCAACC TCGCCCACGA TCTCATGCAG
ATGCTGTGGT TCCGCCCCCA TAACCGCTTC GGGCCGGGGC TCTATCTCGT CGGCGGCGGC
ACCCATCCAG GCTCCGGTCT TCCGGTGATC TACGAGGGTG CGCGCATCTC GGCCCGGCTC
CTGATCGAGG ATCTCGCCAA GGAGAAGGCC CCCGCGATCC TGGCGGACCT GCCGACGACT
TCGCCGCTCG CCACGCAGGG CGATCCGAGT TGA
 
Protein sequence
MLQSREGLRT LSGRRTIVVG AGPGGLATAL LLAKAGLHVT LIEKDAQVGG RTKTVEAPGG 
YRFDIGPTFF LYPQILADIF ESCGERLEDH VRLERLDPQY NLVFEGEGGI SGQIRATGDV
PRLKAEIARL APADAGNVEK FFEENRTKLN YFKPVLEQPF DNILSMASPA MLAALPHLHP
GRSVDRDLKR YFADPRVRLA FSFQTKYLGM SPFRCPSLFT ILSFLEYEHG VYHPVGGCGA
VSEAMAGLAR RMGVDIRLGQ SVERILFEGK RATGVVVDGE TLKADAVVVN GDFAKVIRDL
VPEERRPRWR DAKIGKARLS CSTYMLYLGI EGKMPESLGH HTILLAKEYE RNIKEITGGT
LPMEPSIYVQ HAGFTDGGMA PPGHTALYVL VPVPNLKAGI DWETVGPTYR KLILERLKLL
GLPDIESRIR YERVVDPRDW RDEFAVHEGA TFNLAHDLMQ MLWFRPHNRF GPGLYLVGGG
THPGSGLPVI YEGARISARL LIEDLAKEKA PAILADLPTT SPLATQGDPS