Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_3750 |
Symbol | |
ID | 7115411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 3961460 |
End bp | 3963052 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643526485 |
Product | phytoene desaturase |
Protein accession | YP_002422497 |
Protein GI | 218531681 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTGCAGT CGCGGGAAGG TTTGCGTACC CTGTCGGGCC GCCGCACAAT CGTCGTCGGG GCCGGCCCCG GCGGGCTTGC AACGGCGCTG CTCCTGGCCA AGGCCGGACT GCACGTCACG CTGATCGAGA AGGACGCCCA AGTCGGCGGG CGCACCAAGA CCGTGGAGGC GCCGGGCGGC TACCGCTTCG ACATCGGCCC GACCTTCTTC CTCTATCCGC AGATCCTCGC CGACATCTTC GAATCCTGCG GCGAGCGTCT GGAGGACCAT GTCCGGCTGG AGCGGCTCGA CCCGCAATAC AATCTCGTCT TCGAGGGTGA GGGCGGCATT TCGGGGCAGA TCCGCGCCAC CGGCGACGTG CCGCGGCTGA AGGCCGAGAT CGCCCGCCTC GCCCCCGCCG ATGCCGGGAA CGTCGAAAAA TTCTTCGAAG AGAACCGGAC CAAGCTGAAC TACTTCAAGC CGGTGCTGGA ACAGCCCTTC GACAACATCC TGTCGATGGC GAGCCCGGCG ATGCTGGCCG CCCTCCCCCA TCTCCATCCC GGCCGCAGCG TGGACCGGGA TCTCAAGCGC TATTTCGCCG ACCCGCGGGT GCGCCTCGCC TTCTCGTTCC AGACCAAATA TCTCGGGATG AGCCCCTTCC GCTGCCCGAG CCTGTTCACG ATCCTCTCGT TCCTCGAATA CGAGCACGGG GTCTACCACC CGGTCGGCGG CTGCGGCGCG GTCTCGGAGG CGATGGCGGG GCTGGCCCGC CGCATGGGCG TCGACATCCG CCTCGGGCAA TCGGTCGAGC GGATCCTGTT CGAGGGCAAG CGCGCCACCG GCGTGGTCGT CGACGGCGAG ACGCTGAAGG CCGATGCGGT CGTCGTGAAC GGCGACTTCG CCAAGGTGAT CCGCGATCTC GTGCCGGAGG AGCGGCGCCC GCGTTGGCGT GACGCCAAGA TCGGCAAGGC GCGGCTCTCC TGCTCGACCT ACATGCTCTA TCTCGGCATC GAGGGTAAAA TGCCCGAGAG CCTGGGCCAC CACACCATCC TGCTGGCCAA GGAATACGAG CGCAACATCA AGGAGATCAC CGGCGGCACG CTGCCGATGG AGCCTTCGAT CTACGTGCAG CATGCCGGCT TCACCGATGG CGGTATGGCG CCGCCCGGCC ACACCGCCCT CTACGTGCTG GTGCCGGTGC CGAACCTGAA GGCGGGCATC GATTGGGAGA CGGTCGGCCC GACCTACCGC AAGCTGATTC TGGAGCGCTT GAAGCTCCTC GGCCTTCCCG ACATCGAGAG CCGCATCCGT TACGAGCGCG TGGTCGATCC CCGCGACTGG CGCGACGAGT TCGCGGTGCA TGAGGGCGCG ACCTTCAACC TCGCCCACGA TCTCATGCAG ATGCTGTGGT TCCGCCCCCA TAACCGCTTC GGGCCGGGGC TCTATCTCGT CGGCGGCGGC ACCCATCCAG GCTCCGGTCT TCCGGTGATC TACGAGGGTG CGCGCATCTC GGCCCGGCTC CTGATCGAGG ATCTCGCCAA GGAGAAGGCC CCCGCGATCC TGGCGGACCT GCCGACGACT TCGCCGCTCG CCACGCAGGG CGATCCGAGT TGA
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Protein sequence | MLQSREGLRT LSGRRTIVVG AGPGGLATAL LLAKAGLHVT LIEKDAQVGG RTKTVEAPGG YRFDIGPTFF LYPQILADIF ESCGERLEDH VRLERLDPQY NLVFEGEGGI SGQIRATGDV PRLKAEIARL APADAGNVEK FFEENRTKLN YFKPVLEQPF DNILSMASPA MLAALPHLHP GRSVDRDLKR YFADPRVRLA FSFQTKYLGM SPFRCPSLFT ILSFLEYEHG VYHPVGGCGA VSEAMAGLAR RMGVDIRLGQ SVERILFEGK RATGVVVDGE TLKADAVVVN GDFAKVIRDL VPEERRPRWR DAKIGKARLS CSTYMLYLGI EGKMPESLGH HTILLAKEYE RNIKEITGGT LPMEPSIYVQ HAGFTDGGMA PPGHTALYVL VPVPNLKAGI DWETVGPTYR KLILERLKLL GLPDIESRIR YERVVDPRDW RDEFAVHEGA TFNLAHDLMQ MLWFRPHNRF GPGLYLVGGG THPGSGLPVI YEGARISARL LIEDLAKEKA PAILADLPTT SPLATQGDPS
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