Gene Mchl_3688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3688 
Symbol 
ID7115349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3886030 
End bp3887211 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content65% 
IMG OID643526423 
Producturea ABC transporter, permease protein UrtC 
Protein accessionYP_002422435 
Protein GI218531619 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID[TIGR03408] urea ABC transporter, permease protein UrtC 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.852512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACC AGAAGACAAG TCCCATGCAG TCCCTGTCGA AGGCGGTTAC CGTCAACGAC 
AACCCCTTCA TGAAGCCGGT CGAGTGGGTC AGCCTCGCGC TGCTGGCCGG CGTGATCCTG
GTGGTCCTGC CGCTCGTGCT CGACGGCTTC CGCCTCAACC TCGTCGGCAA GTATCTCACC
TACGCCTTCG TCGCCCTCGG CCTCGTCATC TGCTGGGGCT ATGCCGGCAT CCTCTCGCTC
GGCCAGGGCG TGTTCTTCGG CCTCGGCGGC TACTGCATGG CGATGTACTT GAAGCTGGAG
GCTTCGAGCG TCGAAAATAC GAAAATCCAG TCAACGCCGG GCATTCCCGA CTTCATGGAC
TGGAACCAGA TCACGGAGCT TCCGTGGTTC TGGCACCCGT TCCAGAGTCT GCCGCTGACG
CTGCTCCTCG TCGTCGCGGT GCCGGTGGCC TTCGCCTTCC TCATCTCGGT GGCGATGTTC
AAGCGCCGCG TTGGCGGCAC CTACTTCGCC ATCATCACCC AGGCCATCGC CGCGATCCTG
ACGATCCTGA TCGTCGGCCA GCAGGGCTAC ACCGGCGGCA TCAACGGCAT CACCGATCTG
CGCACCCTCC ACGGCTGGGA CATCCGCCAG GATAGCGCGA AGTTCGTCCT CTACTTCGTC
AATGGCGGCC TGCTGATCGG CTGTATCCTG ATGGCGCAGT ACGTGAAGAA GTCGAAGCTC
GGGCGCATTC TCGTCGCCAT GCGCGAAAAG GAGGACCGGG TCCGGTTCTC GGGCTACTCG
GTGGCGGGCT TCAAGGTGTT CGCCTACTGC CTCGCGGCTG CCTTCGCCGC GATCGGCGGG
GCGATGTTCA CCCTCCAAGT CGGGTTCATG TCACCCTCCT TCGTCGGCAT CGTGCCCTCG
GTCGAGATGG TGATCTACAC CGCGGTCGGC GGGCGCCTCT CGCTCTTCGG CGCGGTCTGG
GGAACGCTGC TGGTCAACTG GGCCAAGACG AGCTTCTCCG AATCCTTCCC CGACCTCTGG
CTGTTCGGCC TCGGCGGCCT GTTCATCGCC GTGGTGCTGA TCTTCCCCAA CGGTCTCGCC
GGCATCTGGC GCGAGCACAT CGAACCCCGC CTGTTCCGCA AGGCCAAGGG TCTGGCCCCC
GTCGCCGGCC CCGCCCTGCC CCACGGCACC CCGGCCGAGT GA
 
Protein sequence
MTNQKTSPMQ SLSKAVTVND NPFMKPVEWV SLALLAGVIL VVLPLVLDGF RLNLVGKYLT 
YAFVALGLVI CWGYAGILSL GQGVFFGLGG YCMAMYLKLE ASSVENTKIQ STPGIPDFMD
WNQITELPWF WHPFQSLPLT LLLVVAVPVA FAFLISVAMF KRRVGGTYFA IITQAIAAIL
TILIVGQQGY TGGINGITDL RTLHGWDIRQ DSAKFVLYFV NGGLLIGCIL MAQYVKKSKL
GRILVAMREK EDRVRFSGYS VAGFKVFAYC LAAAFAAIGG AMFTLQVGFM SPSFVGIVPS
VEMVIYTAVG GRLSLFGAVW GTLLVNWAKT SFSESFPDLW LFGLGGLFIA VVLIFPNGLA
GIWREHIEPR LFRKAKGLAP VAGPALPHGT PAE