Gene Mchl_3682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3682 
Symbol 
ID7115671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3880040 
End bp3881500 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content66% 
IMG OID643526417 
ProductCarbohydrate-selective porin OprB 
Protein accessionYP_002422429 
Protein GI218531613 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3659] Carbohydrate-selective porin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAGC GAATGACACA GACACGGGCC AGACGCCGCC GCGGCGTGAG AATCGGAACG 
GCCGGAGCCC TGCTGGCGGC AAGCCTGACC ACGGCGACCG GCGTCTCCGC GCAGCAGCCC
TCTCCGGTGG GCCAGTTCAA CGATCAGACC CAGCCGCGCA CCGATCCGCG CATCGCCGAG
AAACCCAGCG ATCCCGTCCG CGTCGGCCCG CTGGCGCCCT GGGCCACCCA CATGGCCGAG
CGCGGGCTCA CCTTCGACAT CAACATCTAC AACTTCTACC AAGCCAACCC TTCGGCCGGC
CTGCGCACCG GAGAGCAGTC GAACTCGACC TACTTCGTCC TCTCCATGAC CGCCGACATG
CAGCGCATCG CCAACATCAG TGGCGGCACC ATCAAGTTCA CGCAAACCTT CTTCGGCAAC
GTCCGCAACC TCAACATGGC CGCCGATATC GGCGACACCA CGGTCGGCTA CCAGCCGCCG
TTCAACCCCA ACAACAACCG CCTCTCGCTG CTCACCTACC AGCAGAAGCT CCTCGACGAC
CGCCTCGTCA TCGAGGTCGG CCGCACCCAC CCCGATCGCT ACTACGGCCT GCCGCCGTGC
AACTCGATCA ATTCCTGCTT CCAGGACCTG TTCTACATCA ACGCCGGCTT CACCTCGCCG
CTCTACGCGG TCTGGGGCGC GAACGCCGCC TACCAGCTCT CGCCCACCAG CTACGTCCAG
GCCGGCGCCT TCTCGGTGAA CCCCGGCACC AACGCACTGT CGGGCTACGA TTTCGGCTAC
GAGCGCCTCT CGGGCGCGCT GGTGATGACC GAGATCGGCA CCAAGACCGA CTACACCATG
ACCGCCTATC CCGGCCGCGC CTCGCTCACC GGCTTCTTCA ACACGGCGGA TCACGACGAC
AACTTCAAGA CGGTGTTCGG CACCTCGAAG GGCCTGAACC CCGGCGCCCC GGTGCTGCAG
AAATCGGGCA CGTCCGGCAT CGTGCTCACC GGCACGCAGA CGGTCTGGCG CGCCGATGGC
GGCCTGGTCG CCAACCCGCA CCCGACGGCG ATCTCGCTCT ACACGGGCAC GGGCTACTCG
TTCGATCCGA CGGTGCCGAT CCGCTTCAAC TCGTTCGTCG GCGTGCGCCT CGACGCGCCC
GACCAGAGCC GGCCCAACGA CAGCTACGGC CTGAAGATGA ACTGGCAGCG TTTGTCGGAG
AACTACACGC AGTTCCTGTC TGACGCGAAC TTCATCTCGG GCGGCTCGGG CGCCCCGTAT
TCACGCGACA AGTTCGTGTT CGAGGCCAAC GCGCATTTCG ATGTCGGCGC GGGCGTGATC
ATCGAGCCGG TGGTCCAGTA CGTGGTCAAC CCGAACTCGT TCTGGAACCC CTTCACCGCG
CGGCGCGCCA AGGACGGCTT CTACGCCGGC GCCACCCTCG TCGTCCCGCT CGGCACCCTG
CTCGGCCTCG CTCCGGGCTA G
 
Protein sequence
MLERMTQTRA RRRRGVRIGT AGALLAASLT TATGVSAQQP SPVGQFNDQT QPRTDPRIAE 
KPSDPVRVGP LAPWATHMAE RGLTFDINIY NFYQANPSAG LRTGEQSNST YFVLSMTADM
QRIANISGGT IKFTQTFFGN VRNLNMAADI GDTTVGYQPP FNPNNNRLSL LTYQQKLLDD
RLVIEVGRTH PDRYYGLPPC NSINSCFQDL FYINAGFTSP LYAVWGANAA YQLSPTSYVQ
AGAFSVNPGT NALSGYDFGY ERLSGALVMT EIGTKTDYTM TAYPGRASLT GFFNTADHDD
NFKTVFGTSK GLNPGAPVLQ KSGTSGIVLT GTQTVWRADG GLVANPHPTA ISLYTGTGYS
FDPTVPIRFN SFVGVRLDAP DQSRPNDSYG LKMNWQRLSE NYTQFLSDAN FISGGSGAPY
SRDKFVFEAN AHFDVGAGVI IEPVVQYVVN PNSFWNPFTA RRAKDGFYAG ATLVVPLGTL
LGLAPG