Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_3682 |
Symbol | |
ID | 7115671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 3880040 |
End bp | 3881500 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643526417 |
Product | Carbohydrate-selective porin OprB |
Protein accession | YP_002422429 |
Protein GI | 218531613 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3659] Carbohydrate-selective porin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGAGC GAATGACACA GACACGGGCC AGACGCCGCC GCGGCGTGAG AATCGGAACG GCCGGAGCCC TGCTGGCGGC AAGCCTGACC ACGGCGACCG GCGTCTCCGC GCAGCAGCCC TCTCCGGTGG GCCAGTTCAA CGATCAGACC CAGCCGCGCA CCGATCCGCG CATCGCCGAG AAACCCAGCG ATCCCGTCCG CGTCGGCCCG CTGGCGCCCT GGGCCACCCA CATGGCCGAG CGCGGGCTCA CCTTCGACAT CAACATCTAC AACTTCTACC AAGCCAACCC TTCGGCCGGC CTGCGCACCG GAGAGCAGTC GAACTCGACC TACTTCGTCC TCTCCATGAC CGCCGACATG CAGCGCATCG CCAACATCAG TGGCGGCACC ATCAAGTTCA CGCAAACCTT CTTCGGCAAC GTCCGCAACC TCAACATGGC CGCCGATATC GGCGACACCA CGGTCGGCTA CCAGCCGCCG TTCAACCCCA ACAACAACCG CCTCTCGCTG CTCACCTACC AGCAGAAGCT CCTCGACGAC CGCCTCGTCA TCGAGGTCGG CCGCACCCAC CCCGATCGCT ACTACGGCCT GCCGCCGTGC AACTCGATCA ATTCCTGCTT CCAGGACCTG TTCTACATCA ACGCCGGCTT CACCTCGCCG CTCTACGCGG TCTGGGGCGC GAACGCCGCC TACCAGCTCT CGCCCACCAG CTACGTCCAG GCCGGCGCCT TCTCGGTGAA CCCCGGCACC AACGCACTGT CGGGCTACGA TTTCGGCTAC GAGCGCCTCT CGGGCGCGCT GGTGATGACC GAGATCGGCA CCAAGACCGA CTACACCATG ACCGCCTATC CCGGCCGCGC CTCGCTCACC GGCTTCTTCA ACACGGCGGA TCACGACGAC AACTTCAAGA CGGTGTTCGG CACCTCGAAG GGCCTGAACC CCGGCGCCCC GGTGCTGCAG AAATCGGGCA CGTCCGGCAT CGTGCTCACC GGCACGCAGA CGGTCTGGCG CGCCGATGGC GGCCTGGTCG CCAACCCGCA CCCGACGGCG ATCTCGCTCT ACACGGGCAC GGGCTACTCG TTCGATCCGA CGGTGCCGAT CCGCTTCAAC TCGTTCGTCG GCGTGCGCCT CGACGCGCCC GACCAGAGCC GGCCCAACGA CAGCTACGGC CTGAAGATGA ACTGGCAGCG TTTGTCGGAG AACTACACGC AGTTCCTGTC TGACGCGAAC TTCATCTCGG GCGGCTCGGG CGCCCCGTAT TCACGCGACA AGTTCGTGTT CGAGGCCAAC GCGCATTTCG ATGTCGGCGC GGGCGTGATC ATCGAGCCGG TGGTCCAGTA CGTGGTCAAC CCGAACTCGT TCTGGAACCC CTTCACCGCG CGGCGCGCCA AGGACGGCTT CTACGCCGGC GCCACCCTCG TCGTCCCGCT CGGCACCCTG CTCGGCCTCG CTCCGGGCTA G
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Protein sequence | MLERMTQTRA RRRRGVRIGT AGALLAASLT TATGVSAQQP SPVGQFNDQT QPRTDPRIAE KPSDPVRVGP LAPWATHMAE RGLTFDINIY NFYQANPSAG LRTGEQSNST YFVLSMTADM QRIANISGGT IKFTQTFFGN VRNLNMAADI GDTTVGYQPP FNPNNNRLSL LTYQQKLLDD RLVIEVGRTH PDRYYGLPPC NSINSCFQDL FYINAGFTSP LYAVWGANAA YQLSPTSYVQ AGAFSVNPGT NALSGYDFGY ERLSGALVMT EIGTKTDYTM TAYPGRASLT GFFNTADHDD NFKTVFGTSK GLNPGAPVLQ KSGTSGIVLT GTQTVWRADG GLVANPHPTA ISLYTGTGYS FDPTVPIRFN SFVGVRLDAP DQSRPNDSYG LKMNWQRLSE NYTQFLSDAN FISGGSGAPY SRDKFVFEAN AHFDVGAGVI IEPVVQYVVN PNSFWNPFTA RRAKDGFYAG ATLVVPLGTL LGLAPG
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