Gene Mchl_3494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3494 
Symbol 
ID7114252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3678430 
End bp3678981 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content71% 
IMG OID643526230 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_002422242 
Protein GI218531426 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.915426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTCGA GCCCTCCTTC GCCTGAAGGT TGCGCAGCAC CGCTCGGGAG GGCGACCCTG 
CATCTCTCGC TTCACACGGA TTACGGCCTG CGCCTGCTCA TGCACCTGAC GCTGGCCGAG
CGGGGCGTCT GGGTCGCGAC CCCGGCCGTC GCACAACGCT TCGACATCTC GGTGCACCAT
CTCCAGAAGA TCGCCCAGAC GCTGGTCCGG GCCGGTGTCG TCGAGGCCAG GCAGGGTCGT
TCCGGGGGCG TGCGTCTCGC GCGGGACGCG CGCGAGATCC GGCTCGGACG GCTCGTCGCC
GATCTGGAGG GGGTCGGCAC GGTGGCCGAT TGCCGGCGCG ACCCCTGCCC TCTCCTGGGC
CGCTGCCGCC TCAAATGGGC CTTCGACGCG GCGGAGCAGG CGTTCTTCCT CGAACTCGAC
CGCCTCACCC TCGCCGACGT GGTGGCCGGG CCGACGGCAG CCGCACTTCG CTCCCTCTTT
CGCGCCGAGC CGGGAGACGG GGGTGCGACG CCCGCCGCGC CCGTTCCGAC CGATCCGACT
CCTAGCAATT GA
 
Protein sequence
MGSSPPSPEG CAAPLGRATL HLSLHTDYGL RLLMHLTLAE RGVWVATPAV AQRFDISVHH 
LQKIAQTLVR AGVVEARQGR SGGVRLARDA REIRLGRLVA DLEGVGTVAD CRRDPCPLLG
RCRLKWAFDA AEQAFFLELD RLTLADVVAG PTAAALRSLF RAEPGDGGAT PAAPVPTDPT
PSN