| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_3430 |
|---|
| Symbol | |
|---|
| ID | 7116077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 3617624 |
|---|
| End bp | 3619525 |
|---|
| Gene Length | 1902 bp |
|---|
| Protein Length | 633 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643526165 |
|---|
| Product | Tetratricopeptide TPR_2 repeat protein |
|---|
| Protein accession | YP_002422178 |
|---|
| Protein GI | 218531362 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.345499 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCATGT TCGGATACGC CGCCCGCCGG AGCGCCACCG CGCTCACCCT GCTGCTTGCT
TCGACCGGTC TCGGCTCCCT GCCGGCGGCG GCCATGCAGC CGCGGGAATC TTCACCGCTC
TCCGAGTACG AGCCGGCGGA ATCGCTCGAG GGCAACTTCC TCTCCGCCTA TATCGCCGGT
GCCTCGAAGG ACACGGCCGC CGCCGCGAGC TACTACCGCG AGGCGGTGAA GGGCGACCCG
CGCAACGCCG AGCTTCTGGA GCGCGCCTTC GTGTCGCTCC TCGCCGACGG CGCGATGACC
GACGCCTTCC GCGCCGCCGA GCGGCTCGCC ACCCGCGAAA GCTCGAACGG CCTCGCCCAG
CTCGCCCTCG GCGTGCGCCA GCTCAAGGCC GGCCAGTACG GCCCCGCCCG CCAGAGCTTC
GGCCGCAGCG GCCGGGGTGC GGCCGCCGAC CTCACCGGGA CGCTGCTGAC TGCCTGGGCC
TATGCCGGCG CGGGCGACGG CAAGCGCGCC TACGAGACGC TGAACCGCCT GCGCGGCGAG
CGCTACTTCA ACGTCTTCCG CGACTACCAT GCCGGGCTGA TCGCCTCGGT CATCGGTGAC
CGGGCTGAGG CCGAGCGCAA GCTGAAGGCG GCCTACGACG CCGACCACAA CACCCTGCGC
ATCGTCGACG GCTATGCCCG CTTCGAAGCC GGCATCGGCC GCACCGATCT CGCCATCGAC
GCCTACAGCG AGTTCGAGAA GGTGATGCCG CGCCACCCCC TGGTGGTGGA CGCTCTCGAC
AAGCTCAAGG CCGGTAAGCC GCTCAGCCCC CTGATCGCCT CCGCTCAGGA GGGCGCGGCG
GAAGTGCTGT ACGGGCTCGG TTCGGCCGGC TCGACGCAGG GCGACGAGCT TCCGGCGGTG
GTCTATCTGC GGCTCGCGCT CTACCTCGCC CCCGACCACG CCGTGGGACG GCTGACGCTC
GCCGACGCCC TCGACCGCAT GAAGCAGGTC GAGCGCTCGA ACGAGGCCTA TGCGCAGATC
CCGGCTTCCT CGCCGCTCAA GCTCAACGCC GACATCCAGA TCGGTCTCAA CCTCGAGCAG
TTGGGCCGGG GTGACGAGGC GCTCCAGCAC CTCGACACGG TCCTCAAGGC GAACCCCGAC
AACGTCGACG TCATCTCGGC GCTGGGCAAC GTGCAGCGCG CGCGCAAAAA GTTCACCGAG
GCGACCGAGA CCTATACCCG CGCGATCAAC TTGATCGAGC CCGGCCGTGA GGCCAACAAC
TGGACGCTGT TCTACTTCCG CGGCACGGCC TACGAGCGGG CCGGCGAGTG GCAGAAGGCC
GAGGCTGACC TCAAGAAGGC GCTGAACCTC GTTCCGCCGA CCCAGCCGAA CGCTAAGGCG
CAGGTTCTCA ACTACCTCGC CTATTCCTGG GTCGATCGGA ACATGAACAT CGACGACAGC
TTCACCATGC TGAAGCAGGC CGTCGATCTC TCTCCCCGCG ACGGGATGAT CATCGACAGC
CTCGGCTGGG CCTATTTCCG CCTCGGCCGC TGGGACGACG CGGTGCGGGA GCTGGAGAAG
GCGGTCGAGC TGAAGCCGGG CGACCCGACC ATCAACGACC ACCTCGGCGA TGCCTATTGG
CGCACCGGCC GGCGGCTTGA GGGCAAGTTC CAGTGGCAGC ACGCCAAGGA CCTGAACCCC
GAGCCCGAGG AGCTCGCCAA GATCAACGCC AAGCTGAAGG ACGGCCTGCC CGAGCCGGAC
AAGCCGACCG CCACCGCCGA GAACCCGCCC GCGCAGGACC CGGCGCAGAC CGTGCCCGCC
CCGGTGGCGG CGCCGCACAA CGCGGAGAAC CCGGAATTGC CGAAGGGCGC CCCCGCCCCG
AGCGAGCCGC CGGGCGCCGC GGACAAGAAG CCGGGGAAGT AA
|
|---|
| Protein sequence | MPMFGYAARR SATALTLLLA STGLGSLPAA AMQPRESSPL SEYEPAESLE GNFLSAYIAG
ASKDTAAAAS YYREAVKGDP RNAELLERAF VSLLADGAMT DAFRAAERLA TRESSNGLAQ
LALGVRQLKA GQYGPARQSF GRSGRGAAAD LTGTLLTAWA YAGAGDGKRA YETLNRLRGE
RYFNVFRDYH AGLIASVIGD RAEAERKLKA AYDADHNTLR IVDGYARFEA GIGRTDLAID
AYSEFEKVMP RHPLVVDALD KLKAGKPLSP LIASAQEGAA EVLYGLGSAG STQGDELPAV
VYLRLALYLA PDHAVGRLTL ADALDRMKQV ERSNEAYAQI PASSPLKLNA DIQIGLNLEQ
LGRGDEALQH LDTVLKANPD NVDVISALGN VQRARKKFTE ATETYTRAIN LIEPGREANN
WTLFYFRGTA YERAGEWQKA EADLKKALNL VPPTQPNAKA QVLNYLAYSW VDRNMNIDDS
FTMLKQAVDL SPRDGMIIDS LGWAYFRLGR WDDAVRELEK AVELKPGDPT INDHLGDAYW
RTGRRLEGKF QWQHAKDLNP EPEELAKINA KLKDGLPEPD KPTATAENPP AQDPAQTVPA
PVAAPHNAEN PELPKGAPAP SEPPGAADKK PGK
|
|---|
| |