Gene Mchl_3408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3408 
SymbolhppA 
ID7116055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3592045 
End bp3594177 
Gene Length2133 bp 
Protein Length710 aa 
Translation table11 
GC content67% 
IMG OID643526143 
Productmembrane-bound proton-translocating pyrophosphatase 
Protein accessionYP_002422156 
Protein GI218531340 
COG category[C] Energy production and conversion 
COG ID[COG3808] Inorganic pyrophosphatase 
TIGRFAM ID[TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAC TTTTGCTGAT CATCGTGGGC GGGCTCTGCG CCGTTGCCTA CGGTGTCGTG 
ACTATCCGTG ACGTAATGCG ACGCGATGCC GGCACCCAGC GCATGCAGGA GATCGCAGGC
GCCATCGCCG AGGGCGCACA GGCATATCTC AGGCGCCAAT ACGCCACGAT CGGGATCGTC
GGCGTCGTCC TCTTCGTCCT TCTGGCCTAC TTTCTCGGCA TCAAGGTCGC CATCGGCTTC
CTGATCGGCG CGGTGCTCTC GGGCGCGGCC GGCTTCATCG GCATGAACGT CTCGGTCCGT
GCCAATGTCC GCACGGCGCA GGCCGCCACC CAGTCGCTCG GCGGCGGCCT GGAGGTCGCC
TTCAAGTCCG GCGCGGTCAC CGGCATGCTG GTGGCGGGCC TCGCGCTGCT CGGTGTCGCC
CTCTACTACC TGTTCCTCAC CCGCGGCGCT GGGCTGGCGC CGGGAAGCCG CGAAGTCATC
GACTCGCTGG TGGCGCTTGG CTTCGGCGCC TCGCTGATCT CGATCTTCGC GCGGCTGGGC
GGCGGTATCT TCACCAAGGG TGCTGATGTC GGCGGCGATC TCGTCGGCAA GGTCGAGGCC
GGTATTCCCG AAGATGATCC GCGCAACCCC GCCACCATCG CCGACAACGT GGGCGACAAT
GTCGGCGACT GCGCCGGCAT GGCCGCGGAC CTGTTCGAGA CCTATGCGGT GACCGTGGTC
GCCACCATGG TGCTTGCCGC GATCTTCTTC GCGGGCAACG CGCCCGTGCT CGAAGCGATG
ATGATCTACC CGCTCGCCAT CGGGGCGGCC TGCATCGTCA CCTCGATCAT CGGCACCTAC
GCGGTGAAGC TCGGTGCCAA CCAGTCGATC ATGGGCGCAC TCTACAAGGG CCTGATCGCG
GCGGGTGTGC TCTCGATCGT GGCCATCGCC GGCGTAAATC TCGCGCTGTT CGGCGGGTTC
TCGACCACCT TCACGACGAA TACCGGCCTG ACCTTCTCTT CGGGTGCCCT GTTCGGTTGC
GCGGTGCTCG GCCTCGTCAT CACCGCGCTG ATCGTCGTCA TCACCGAGTA CTACACCGGC
ACGAACTTCC GCCCGGTGAA GTCGATCGCG ACCGCCTCCG TCACCGGTCA CGGCACCAAC
GTGATCCAGG GGCTCGCGAT CTCGCTCGAA TCGACGGCGC TGCCGGCCCT CGTCATCGTG
GCGGGCATCA TCTCCACCTA CGCGCTGGCC GGCCTGTTCG GCATCGCCAT CGCGGTCACG
GCGATGCTGG CGCTCGCGGG CTTCATCGTC GCCCTCGATG CCTTCGGCCC GGTCACCGAC
AATGCCGGCG GTATCGCCGA GATGGCAGGC CTCCCCGCCG AGGTGCGCAA GGCGACCGAC
GCGCTCGATG CGGTCGGCAA CACCACCAAG GCCGTCACCA AGGGCTACGC CATCGGCTCG
GCCGGTCTCG GCGCCCTGGT GCTGTTTGCC GCCTATACCT CCGACCTGAA CTACTTCATC
GCCAATGCCA GCCCGACGCA GTACCGCTTC TTCCAGGGGG TGAGCGTCGA TTTCTCCCTC
TCCAATCCCT ACGTCGTGGT GGGCCTCCTG CTCGGCGGCC TGATCCCGTT CCTGTTCGCG
GGTATCGCCA TGACGGCGGT GGGCCGCGCG GCCGGTGCGG TGGTCGAGGA GGTGCGGCGC
CAGTTCCGCG CCAAGCCTGG CATCATGCAG GGCACCGACC GGCCGGATTA CGGCCGCGCG
GTGGACATGC TGACCCGGGC GGCGATCAAG GAGATGATCA TCCCCTCGCT GCTTCCGGTG
CTCTCGCCCA TTGTGATCTT CTTCGTGATC CAGGCGATCG CGGGCAAGTC GCAGGCTTTC
GCCACGGTCG GCGCCTCGCT GCTCGGCGTG ATCCTGACCG GCCTCTACGT CGCGATCTCA
ATGACCTCGG GCGGCGGCGC CTGGGACAAC GCCAAGAAGT ACATCGAGGA CGGCCACCAC
GGCGGCAAGG GCTCGGACGC GCACAAGGCG GCCGTGACCG GCGACACCGT CGGCGACCCC
TACAAGGACA CGGCGGGCCC CGCCGTGAAC CCGGCGATCA AGATCACCAA CATCATCGCC
CTGTTGCTGC TCGCCGTGCT CGCCCACGCC TGA
 
Protein sequence
MTALLLIIVG GLCAVAYGVV TIRDVMRRDA GTQRMQEIAG AIAEGAQAYL RRQYATIGIV 
GVVLFVLLAY FLGIKVAIGF LIGAVLSGAA GFIGMNVSVR ANVRTAQAAT QSLGGGLEVA
FKSGAVTGML VAGLALLGVA LYYLFLTRGA GLAPGSREVI DSLVALGFGA SLISIFARLG
GGIFTKGADV GGDLVGKVEA GIPEDDPRNP ATIADNVGDN VGDCAGMAAD LFETYAVTVV
ATMVLAAIFF AGNAPVLEAM MIYPLAIGAA CIVTSIIGTY AVKLGANQSI MGALYKGLIA
AGVLSIVAIA GVNLALFGGF STTFTTNTGL TFSSGALFGC AVLGLVITAL IVVITEYYTG
TNFRPVKSIA TASVTGHGTN VIQGLAISLE STALPALVIV AGIISTYALA GLFGIAIAVT
AMLALAGFIV ALDAFGPVTD NAGGIAEMAG LPAEVRKATD ALDAVGNTTK AVTKGYAIGS
AGLGALVLFA AYTSDLNYFI ANASPTQYRF FQGVSVDFSL SNPYVVVGLL LGGLIPFLFA
GIAMTAVGRA AGAVVEEVRR QFRAKPGIMQ GTDRPDYGRA VDMLTRAAIK EMIIPSLLPV
LSPIVIFFVI QAIAGKSQAF ATVGASLLGV ILTGLYVAIS MTSGGGAWDN AKKYIEDGHH
GGKGSDAHKA AVTGDTVGDP YKDTAGPAVN PAIKITNIIA LLLLAVLAHA