Gene Mchl_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3400 
Symbol 
ID7116047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3584525 
End bp3585406 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content72% 
IMG OID643526135 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002422148 
Protein GI218531332 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCCTG AGGCGTCCGA CCCGTTCGAG GCGGAGCGGG CGCGGCTGAC CCGCCTCGCC 
TACCGGATGC TCGGCTCCTT CGCCGAAGCG GAGGATGTGG TTCAGAGTGC GTGGCTGCGC
TGGCAGGCGG CGGACCGCGC CGCCGTCGCG GTGCCGGGTG CCTTCCTGTC GCGCATCGTC
ACCCGGCTCT GCCTCGACAC GATGAAATCG GCCCGCACCC GCCGGGAGGT CTATGTCGGG
CCGTGGCTGC CGGAACCCTC GCTCGACACG GAAGAGACGA TCGACGGCGA CGATCTCACC
CTGACGCTGA TGATGGCGCT GGAGCGTCTC TCGCCCCTGG AACGGGCGGC TTTCCTCCTG
CACGACGTGT TCGGCGTGCC CCTCGACGAG GTGGCGGCGA CGCTGGGGCG GGCTGCTCCG
GCAGTGCGCC AGCTCGCCGT GCGGGCCCGC CAGCATGTCC GCGCCGAGCG CCCGCGCTAC
CCCCTGCCGC CCGAGGAGGG CGAGCGGATT GCGCGCGCCT TCTTCGACGC CTCGCGCAGC
GGCGACGTTG CCGCCCTGCG CGGCCTGCTC TCGCAGACCG TGACGATGCG GGCGGATGGT
GGCGGCAAGG TCATCGCCTT CCTCAACCCG ATTCGCGGAA TCGATCGCGT CCTGCGGCTG
TTCTCGGGCC TCGCCCGCAA ATATGCCGGG TCGCCCGCCA CCCTTCTCCG CACCGTGCGG
GTCGACAGCC TGCCGGGCTT CGTCAGCCTG GAACGCGGCG GCGTCCTCCA AGTGACGGCA
CTGGAAATCC GCGACGGGCG GATCGCGGGC ATCTACATCA CCCGCAACCC GGACAAGCTG
CGCCGGGTGG CCGAGGCCAT GGCGATGCCG CCCGCGCGCT GA
 
Protein sequence
MRPEASDPFE AERARLTRLA YRMLGSFAEA EDVVQSAWLR WQAADRAAVA VPGAFLSRIV 
TRLCLDTMKS ARTRREVYVG PWLPEPSLDT EETIDGDDLT LTLMMALERL SPLERAAFLL
HDVFGVPLDE VAATLGRAAP AVRQLAVRAR QHVRAERPRY PLPPEEGERI ARAFFDASRS
GDVAALRGLL SQTVTMRADG GGKVIAFLNP IRGIDRVLRL FSGLARKYAG SPATLLRTVR
VDSLPGFVSL ERGGVLQVTA LEIRDGRIAG IYITRNPDKL RRVAEAMAMP PAR