| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_3336 |
|---|
| Symbol | |
|---|
| ID | 7117104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 3524427 |
|---|
| End bp | 3527624 |
|---|
| Gene Length | 3198 bp |
|---|
| Protein Length | 1065 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643526084 |
|---|
| Product | PAS/PAC sensor hybrid histidine kinase |
|---|
| Protein accession | YP_002422098 |
|---|
| Protein GI | 218531282 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.115718 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGA GTGCCCGCTC CCCGAACCTT AACTTCCTCT CGGGCGGGGG ACGGATGGGC
GAACGTATGC GCGCCCATGA CTGGTCGAAT TCCGCACTAG GACGGCCGGA GACCTGGCCG
CAGTGCCTTC GCTCGGCCGT GAGCCTGATG CTCGGCTCCA AGTTCCCGAT GTTCGTGGCT
TGGGGACCGG AGCTCGGATT CCTCTACAAC GAGCCTTACG CGGAAATCCT CGGCGACAAG
CATCCGGCCG CCCTGGGGAG CCGCTTCCAC GACATCTGGG CCGAGATCTG GGACGACATC
GCGCCGCTGA TCGACCGCGC CATGGCGGGC GAGGCGACAT GGGCCGAGAA CCTGCCGCTC
GTCATGAACC GACACGGCTA TGACGAGCGG ACTTGGTTCA CCTTCTCTTA CTCGCCCGTG
CGGGACGATG AAGGCGAGGT CGGCGGCATG TTCTGCGCCT GCACGGAAAC GACCGCCAAG
GTGAAAGCTG AGGAGGCCCT GCGCGCGAGC GAGGCTCGGG CCTCCGGCGT GCTGGAGGGC
ATGGGCGAGG GCTTCATGCT GCTCGACCGT GATTTCCGCA TCCTACAGAT GAACGCGGAA
GGCTTCCGGT TGGAGGAGCG GCCGCCCGGC GAGGTGCTCG GGCGCTCACA TTGGGAGGTC
TATCCGGGCT CGGAGCGGAT GCCCATCGGA CAAATGTATC TGCGGGCCAT GCGCGGGCGG
ATGCCCTTGA CGCTGGAACA CCTTTACGTC TGGCCCGACG GGCACGCGGC TTGGCTGGAG
GTGCGAGCCT ACCCGCATCC GGAAGGGCTG GCGCTGTTCT ACCGCAATGT GACCGAACGC
CGGGAGCGCG AGGAGGCGCT GCGCGAGGCC GAGGCGCGAC TGCGCGCTCT GGCGGACAAC
CTGCCTGGCG GCATGGTCTA CCAGATCGCG ATGGACAGGG ACGGTTCGAA CCGGCGCTTC
CTCTACGTGT CGCGGGGCTT CGAGCGCATG ACCGGCCTGT CGGCCGAGGC CGCGCTGCTC
GACCCGGCCG CGGCCTACAA CCTAATCCTG CCCGAGTACC GCGAGAGCTT GGCCGCAGCC
GAGCACGTCG CGATCCGGGA CCTCGCGCCG TTCGACTTCG AGACGCCCTT CCGCCGTAGC
GACGGGGAGG TGCGCTGGAG TCGCATCATC TCGGCGCCTC GGCGGCAGCC CGACGGTTCG
CTCGTCTGGG ACGGCATCCA GTTCGACGAT ACCGACCGCA AGCAGGTCGA GGAGCGCCTG
CGCGAGAGCG AGGCCAAGTT CCAGGCAATC GCCAACTCCA TCGACCAGAT GGTGTGGTCG
ACGCGTCCCG ACGGCCACCA CGATTACTTC AACCAACGCT GGTACGACTT CACCGGCGTG
CCGGCAGGCT CGACGGACGG CAAGGACTGG GAGGACATCG TCCACTCGGA CGACCGGGCG
CGCACGTGGA CGTCCTGGAG GGAGTGTCTC GCAACGGGCG AACCCTACCG GATCGAGTAC
CGGCTGCGCC ACCGCACAGG GCAGTACCGC TGGACGCTCG GACGAGCACT GCCGATGCGC
GACGAGGCGG GCCGGATCAC GCGCTGGTTC GGCACCTGCA CCGACATCCA GGACCTCGTC
GAGGCGCGCG AGGTACTGGC GCGCTCGCGC GAGGACCTCG AACGGTTGGT GGCGGAACGT
ACGGCCGACC GTGACCGCAT GTGGCGGCTC TCGACGGACG TCATGCTGGT CGCGCGCTAC
GACGCCGCCA TCGAGGCGGT GAACCCGGCC TGGACCACGC TGCTCGGGTG GGATGAGCGC
GAGCTCATCG GTAGCGCCTT CATGGACCTC GTCCATCCGG ACGACGTCGC CGCCACGCTT
GCGGAGGTCG GGAAGCTGTC GGAGGGTTTG ACCACCCTAC GGTTCGAGAA CCGCTATCGC
CAGAAGGACG GCAGCTACCG CTGGCTCTCG TGGACAGCCG TCCCCGCCGA GGATCTCATC
CACGCGGTCG GGCGTGACAT CACTGCTGAA AAGGAAGCCG CACAAGCCCT CGCGGAAACC
GAGGAGGCGC TGCGCCAAGC CCAGAAGATG GAAGCCGTGG GTCAACTGAC GGGCGGCATC
GCGCACGATT TCAACAACCT CCTGACCGGC ATCGTCGGCT CCCTCGACAT GATGCAGACC
CGCATCGCCC AGGGTCGAAC CGACACCATC GAGAGGTACG CCAAGGCGGC GATGTCCTCG
GCCAATCGCG CGGCCGCCCT GACGCACCGC CTGCTAGCCT TCGCTCGCCG GCAGCCCCTC
GACCCGAAGC CGGTCAACGC CAACACGCTC GTGACCTCGC TGGAGGATCT GCTGCGCCGG
ACCATCGGCG AGGCCATCAG CTTGGAGATC GTCACGGCAG GCGGCCTTTG GCCGACGCTT
TGCGACCCGC ACCAGCTCGA AAGCGCTGTC CTGAACCTGG CCATCAACGC GCGCGACGCC
ATGCCGGACG GCGGCAAGCT CACCATCGAG ACCTGCAACA CACACCTCGA CCGCGCCTAT
GCCAAGCTGC ACCCAGGGGT GGAGCCCGGC CAGTACATCT GCATCTGCGT GACCGATACC
GGCACCGGCA TGCCACCGGA CGTCGTCGCG CGGGCCTTCG ACCCGTTCTT CACGACGAAA
CCCATCGGCC AGGGAACGGG GCTCGGCCTG TCGATGATCT ACGGCTTCGC GCGCCAGTCG
GAGGGTCACG CCAAGATCTA CTCGGAGGTC GGGCAGGGCA CGTCAGTGAA GATTTACCTG
CCGCGCCATC GCGGAGCTTT GGCCGGGGAG GACACGCAGG CATCGGGCCT GACGGAAGCG
CACCGGGCCG AGACCGGCGA GACGGTGCTG GTCGTGGAGG ACGAGCCGGT GGTGCGCGAC
CTCATCGTCG AGGTGCTGCA CGATCTCGGC TACCGGGCCT TGGAGGCGCA GGACGGACCC
TCCGGCCTCG CCGTTCTGCG GTCGCGCGAG CGCATCGACC TCTTGGTCAC CGACGTCGGC
CTACCGGGCT TGAACGGGCG CCAGCTCGCC GACCAGGCCC GCGAGGGGCG GCGCGAGCTC
AAGGTGCTGT TCATCACCGG CTATGCCGAG AACGCGATGT TCGGGAACGG CCACCTCGAA
CCAGGCATGC AGATGATGAC CAAGCCCTTT CCGGTTGAAG CCTTGGCGAC GCGCATCCGC
GAGATGATCC AGAGTTGA
|
|---|
| Protein sequence | MTESARSPNL NFLSGGGRMG ERMRAHDWSN SALGRPETWP QCLRSAVSLM LGSKFPMFVA
WGPELGFLYN EPYAEILGDK HPAALGSRFH DIWAEIWDDI APLIDRAMAG EATWAENLPL
VMNRHGYDER TWFTFSYSPV RDDEGEVGGM FCACTETTAK VKAEEALRAS EARASGVLEG
MGEGFMLLDR DFRILQMNAE GFRLEERPPG EVLGRSHWEV YPGSERMPIG QMYLRAMRGR
MPLTLEHLYV WPDGHAAWLE VRAYPHPEGL ALFYRNVTER REREEALREA EARLRALADN
LPGGMVYQIA MDRDGSNRRF LYVSRGFERM TGLSAEAALL DPAAAYNLIL PEYRESLAAA
EHVAIRDLAP FDFETPFRRS DGEVRWSRII SAPRRQPDGS LVWDGIQFDD TDRKQVEERL
RESEAKFQAI ANSIDQMVWS TRPDGHHDYF NQRWYDFTGV PAGSTDGKDW EDIVHSDDRA
RTWTSWRECL ATGEPYRIEY RLRHRTGQYR WTLGRALPMR DEAGRITRWF GTCTDIQDLV
EAREVLARSR EDLERLVAER TADRDRMWRL STDVMLVARY DAAIEAVNPA WTTLLGWDER
ELIGSAFMDL VHPDDVAATL AEVGKLSEGL TTLRFENRYR QKDGSYRWLS WTAVPAEDLI
HAVGRDITAE KEAAQALAET EEALRQAQKM EAVGQLTGGI AHDFNNLLTG IVGSLDMMQT
RIAQGRTDTI ERYAKAAMSS ANRAAALTHR LLAFARRQPL DPKPVNANTL VTSLEDLLRR
TIGEAISLEI VTAGGLWPTL CDPHQLESAV LNLAINARDA MPDGGKLTIE TCNTHLDRAY
AKLHPGVEPG QYICICVTDT GTGMPPDVVA RAFDPFFTTK PIGQGTGLGL SMIYGFARQS
EGHAKIYSEV GQGTSVKIYL PRHRGALAGE DTQASGLTEA HRAETGETVL VVEDEPVVRD
LIVEVLHDLG YRALEAQDGP SGLAVLRSRE RIDLLVTDVG LPGLNGRQLA DQAREGRREL
KVLFITGYAE NAMFGNGHLE PGMQMMTKPF PVEALATRIR EMIQS
|
|---|
| |