| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_3333 |
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| Symbol | |
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| ID | 7117101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | + |
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| Start bp | 3516978 |
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| End bp | 3519296 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643526082 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002422096 |
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| Protein GI | 218531280 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGCG AGCTGGCGAT GTCTGAAGCG AGTGTCGACA ATCAGACACA AGGATACATC
AGGGCACGCC AGCTTCAGGC CGTAGATCGG CTCATACCAG CGATGATGAT CGCGGTCATC
GCCTGCGCTG GTGCTCTCTA CGCCTTCCAA AGGCACGCCC ATCCTACCGT TCTGCCGATC
TGGTTCGGTG CTGTGCTGGC GGTCTGCGGA TGGCGTACGG CTGCAACGGT CCGCAGGAAC
GCGCGGCCGC CCCGTCGAAC GGCCTCGGCA CCAGCCATGC GGAACCTGAT TGCCGAGGCA
ACCCTCACTG TCGTCTGTCT GATGAGCGTG CCATCTTGGC TGCTCTCGCA GACCACGGGT
ACGACCTACG CGATTCTTGT GTGCCTGCTG ACCGGCATCC TCTGGGCTGG CTGCCTCACC
TTAGCCACCG TACGAGCGGC CGCCATGGTC TACGTCGCTA CGGGAGCCGC CATTGTTGTC
ATCGGGCTGC TCTGGGCCAA TCAGGATTTC GAGCACCTGA TGCTTGCTTC GCTTTTCCCC
CTGGGCGCGC TCACGGCGAT GCGCAGCGTG GATACGCAAG CAAAGATGTT CCTCGACAAC
CAACGCCAGC AGCAATCCCT GACGAAGCAG AGCGATCTCA TCGGTCTGCT ATTGAAGGAT
TATGAGGAGC AGACCAGCGA CTGGCTCTGG GAGACCGATT CCAGCCTGCG GTATACCAAT
CCATCCGATC GCTTCGTCGA GGCTCTGGGC CGGCCGTCGG ACGCCATCCG TGGCGCAACC
CTGGGGTCGC TGCTGCAAGA TGAGGAGGCT ACGGGAAACG GGGCAGCATG CCTCCAGGTT
CGAGCTTGTG CCGAAGCTCG GCAGCCCTTC CGCGATATCG TGGTGCCGTT CACGCGCGCA
GGTGAGATGC GCTGGTGGTC GATTTCAGGC AGACCCGTAT ATGACGAGAC TGGCACCTTT
CTCGGCTATC GCGGAGTGTG CAGCGACGTC ACTGCCACAA AAGATGCCGA ATTACGCATT
GCGCATCTGG CACACCACGA CGCACTCACA GGCCTGCCGA ATCGAGCGTT CATGAGCGAG
AGCTTGCACC AAGCTCTGCG CGATCCCGAT CGAGCGTGCC TTGCTGTGCT CAGCCTCGAT
CTCGACGGCT TCAAGGCCGT CAATGACCGG TACGGCCATC CGGGTGGCGA TGCGCTACTG
ACGTCCGTCG CCGAGCGCCT GCAAAATGAG GTATCCGGCG GCGACATCGT CGCGCGTTTC
GGGGGCGACG AGTTCGTCGT CCTCAATGTG GCCTTCACAT CCCCCTCTGA AGTCGAGGAC
CTCGCGCGCC GCTTGATCGA AAGCCTGAGT ACGCCAGTCC CACTCGACAA TGAGAGCGTG
ACGATCGGCG TCAGCATCGG CATCGCGTTC GCTCCCACGG ATGGCCGCAC GGCAGAGGAG
CTGCTCAAGA ACGCGGACGC GGCGCTCTAC CGCGCTAAGA CGGCGGGCCG AGGCACGTTC
CGCTTCTTCG AGCCTGAGAT GGACCGCAAA CTTCAGGCGC GCCAGCGTCT CGTTCAAGAC
CTACGAAACG CCCTGACACG GGACGAGCTG AGGCTCGACT ATCAGCCCTT CGTCAAATCT
GAAACTGGAG TAATCAGCGG TTGCGAGGCG CTTCTGCGTT GGCGTCACCC CGAGCGCGGT
ATGATTTCGC CAGTCGAATT CATACCGCTG GCCGAGGAGA GCGGGCTTAT TGTACCGATA
GGGATGTGGG TCATCCAGCA GGCCTGCCGT GAGGCAGCGA GCTGGCCGAG TACCTACCGC
ATCTCAGTCA ACGTCTCGCC CGTCCAGTTT CGCAGCCGAG ACCTTCCGCA GGTCATTCTG
GCGGCGCTGA CCAGCTCGGG CCTCGCGCCC GCTCGTCTTG AGGTCGAAGT CACTGAAGCC
GTGCTGATCG ACGACGCGGA CACCGCCCTT GAAATCCTCC GTCAGATCCG AAGCCTTGGA
GTTCGTGTCG CGCTCGACGA TTTCGGAACG GGCTACTCCA GCCTGAGCTA CCTACGCCGC
TTCCCCTTCG ACAAGATCAA GATCGACCGC TCCTTTGTTC AGGAGCTGGA TACTCGCCAT
GACAGCCAGG TCATCGTGCA AGCGATCCGC GACATGGCCC AGGGCCTTGG CATGACGGTC
ACGGCGGAGG GTGTCGAGAC CGATGATCAG GCCAAGCGGC TGCGGCAGAC AGGCTGCGAG
GAGCTCCAAG GTTTCCTCTA CAGCCGCCCG CGGCCAGCTA ACGAGCTCAC GTTCCGCCAT
GGCGAGATGT CCAGCGAGAC GATCCGTCTG CAAGCCTGA
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| Protein sequence | MNSELAMSEA SVDNQTQGYI RARQLQAVDR LIPAMMIAVI ACAGALYAFQ RHAHPTVLPI
WFGAVLAVCG WRTAATVRRN ARPPRRTASA PAMRNLIAEA TLTVVCLMSV PSWLLSQTTG
TTYAILVCLL TGILWAGCLT LATVRAAAMV YVATGAAIVV IGLLWANQDF EHLMLASLFP
LGALTAMRSV DTQAKMFLDN QRQQQSLTKQ SDLIGLLLKD YEEQTSDWLW ETDSSLRYTN
PSDRFVEALG RPSDAIRGAT LGSLLQDEEA TGNGAACLQV RACAEARQPF RDIVVPFTRA
GEMRWWSISG RPVYDETGTF LGYRGVCSDV TATKDAELRI AHLAHHDALT GLPNRAFMSE
SLHQALRDPD RACLAVLSLD LDGFKAVNDR YGHPGGDALL TSVAERLQNE VSGGDIVARF
GGDEFVVLNV AFTSPSEVED LARRLIESLS TPVPLDNESV TIGVSIGIAF APTDGRTAEE
LLKNADAALY RAKTAGRGTF RFFEPEMDRK LQARQRLVQD LRNALTRDEL RLDYQPFVKS
ETGVISGCEA LLRWRHPERG MISPVEFIPL AEESGLIVPI GMWVIQQACR EAASWPSTYR
ISVNVSPVQF RSRDLPQVIL AALTSSGLAP ARLEVEVTEA VLIDDADTAL EILRQIRSLG
VRVALDDFGT GYSSLSYLRR FPFDKIKIDR SFVQELDTRH DSQVIVQAIR DMAQGLGMTV
TAEGVETDDQ AKRLRQTGCE ELQGFLYSRP RPANELTFRH GEMSSETIRL QA
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