| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_3287 |
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| Symbol | |
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| ID | 7117054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | - |
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| Start bp | 3465355 |
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| End bp | 3468366 |
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| Gene Length | 3012 bp |
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| Protein Length | 1003 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643526037 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_002422052 |
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| Protein GI | 218531236 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCGT CCCGTCCGGT GCCACACAGC GATCGTGGAG CCGCCGCACC TGTCCAGAGC
GCGCCGCGGG AGGCTGGGTT GGAAAGCCGC CTCGACGCCC TGTGCCGCTC CGTCGCCGAA
ATCTTCGCCG TCCCCATGGC GGCGATCGCG CTCATCGACG CGGATCGCAT TCGTTTCCGC
GCCCGCTACG GGCTCGCGGA GGCCGTCATC GACCGCGAAG ACGCCCTCTG CCAACACACG
ATCCGCCAGC CACGCGGTCA CGCCCTCGTG GTGTCGGACC TGATCCGTGA CGAGCGTTTC
GTCCATTCTC CCCTCGTCGT CGGCGCGCCG CATGCCCGCT TCTACGCGGG TCTGGCGATC
CGCTCGGGAG CGGGCCGGGT CGTCGGCACG CTGTGCCTGA TGGATCGGGT GCCGCGGGAC
GATGTCTCGT CCGACCGAGT GCGCGTCCTG CAAGAACTGG CGCTCGTCGC CGAGGCGCAT
CTTGAGCTCG ACGAAGCCCG CCGCGCGAGC GAGGCCGCGG AACGCCGGCG GGCGGAGGCG
CATCTCTTGG AATGGGAGGC GCGCCAGAGG GCGCTCGAGG CGGCCCACGC CATGGCCGAA
CAGATCGCCG CCTTCGGCCA TTGGCGGATT GATGCCGGAA CCCGCACCAT CGCGTGGTCG
GACGGGATCG CCCGCATCTT CGGGCGCAAC GCCGAACGCG CGACGCTGCC GCTCGAAACC
CATATCGGCT TCTATCATCC GGATGACCGC GAACGCGTCT GGGCCGCCAT GGACGAGGCG
CTCGCGGGCC GCAGCCGGAC TCTGGGGGGT GGCTACGAGC ACCGCTCTCG CATCCTTCGT
CCCGACGGCG AGATCCGGGT GGTGGCCGTT CACGGGATCG GCGAACACGA TGAGGCGGGC
CGGCTCGTCT CGATCTTCGG CGTCTGCCTC GATGTCACCG GCATGGCCCG CTCCGAGCAG
CGCCTGCGCG AGACCGGCGA GGCAATGCGG GCCGCTCTCG AGGCGATGGA TCAGGGCCTC
GTCATGATCG GCCCCGACGA CCGGGTTCAG GTCCACAACC AGCGCGTCCG CGATCTCCTA
GAACTGCCGG AGGACGTCCT GCACGAGGGT GTGTCCTACG GGGCGGTGCG GCGCTTTCTC
GGCCGGCGCG GCGAGTTCGT GCATGCGCCG CCCGAAGCCC AGGAATGGCT GGAGCACGGT
GACTTCCCGC CCGGCGTCCA ACGCTACGAG GGGATGCGGC CCAACGGCAC GATCCTGGAG
GTGCGGCACG CTCCGATGGC CTCCGGCGGC CACATCTGCA CCTTCACCGA CCTGACGGCG
TCTCGGCAGA GCGAGGCGGC CCTGCGCTCG GCCGAGGCCG ATTACCAGTC GTTGTTTCAG
AATGCGGTGA TCGGCGTCTA TCGGGCCCGG CTCGACGGCG GCATCGTCCA AGCCAACCGG
GCGCTCGCCC GGCTGCACGG CTACGGCGAT GCGGACCTAT CCCTGCCTGA GGGCGGCTTC
AGCCACGACT GGTACATCGA GCCGGGCCGG CACGAGGCCT TTCTGGCCTG CCTGGAGCGC
GAGGGCCACG TCGAGGACTT CGTATCCGAG GTGCGCCGCC ACGCGGGCGG GGAACGCATC
TGGGTCTCCG AGACGGCCTG GGTGGTGCGC GACGCGGCGG GCCGGCCGAT CTGGTTCGAG
GGCACCGTCG CGGATGCGAC GGAGCGCAAG CGTGCCCAGG CGCTGATCGA GCACATGGCC
CGCCACGACG CGCTGACCGG GCTGCCCAAC CGCCGGCTGT TCCAGGAGAC TCTGGCCCGG
GAGATCGACG GGGCCCGGCG CGACGGCGGC TCGGTGGTGG TGCTGTGCTG CGACCTCGAC
CGCTTCAAGG CGGTCAACGA CACCTTCGGG CATCCCGCGG GCGACGCCCT GCTCCGCGTC
ATCGCGGGCC GCCTCCGCGC GACCCTGCGC GAGGGCGACG TGGTGGCCCG GCTCGGCGGG
GACGAGTTCG CGATCATCCT GCCAAGCCGA GGGAAGCAGC GCCGTATCGC CGCCTTCGCC
CGCCGGCTGA TCCAGGCCGC CGGGCGGCCG GTCGATCTCG GCGGCCGCGC CACCACCGTC
GGCGTCAGCA TCGGCGTGGC GGTTTGGCCC AAGCACGGTG ACAGCGCCGA CACCCTGTTC
AAGAACGCCG ACATCGCACT CTACCGGGCC AAGGATTCCG GGCGGAACAC CTTCCGTTTT
TACGAGAGCG GGATGGCTCT CGCGGTCGTG ACCCGCAACC TCCTGGAAAT CGAGATGCGC
GAGTCGATCC GCTCCGGCGG GTTCGCGCTG CATTACCAAC CGATCTTCGC CCTTGCGGAC
GGTGCACCGC AGGGCTTCGA GGCTCTGTTG CGCTGGAATC ATCCGTTGCG CGGGCCGATC
TCGCCGGGGG CCTTCATCCC GCTGGCGGAG GAGAGCGGCC TCATCACCCA GCTCGGCGCC
TGGGCGCTGC ACGAGGCCTG CCGCGAGGCG GCCTCCTGGC CGGGCGATCT GCGGGTCGCC
GTCAACGTCT CGGCGGTGCA GTTCCGCAAG ACGGGGCTGG AGCAGAGCGT CATGCGCGCG
CTCGCGGCCT CGGGCCTACC GGCCGGGCGG CTCGAACTGG AGATCACCGA AAGCGTGCTG
ATGCAGGATT CGGACGCCGT GATCGGTTCT CTGCACCGCC TGCGCGCCAT GGGCGTGCGG
ATCGCGCTCG ACGATTTCGG CACGGGCTAC TCGTCCCTGA GCTACCTGTG CCGGTTCCCC
TTCGACAAGA TCAAGATCGA TCGCGCCTTC ATCCGCGACA TCGACGAGCC CGTGGCGGCG
GCGGTGGTGC GCGCGGTGGT GGGTTTGGGC GAGCGCCTCG GCATGGCCAT CACCGCCGAG
GGCGTGGAGA CGGAGGAGCA ATTGGTGCAG GTGCGGCGCA AGGGCTGCAC CGAGGTGCAG
GGCTTCCTGC TCGGCCGGCC GCTGCCGGCC GCGGAGGCCA TGACCCTCGT CGCGGGGCGG
GTGGCAGCCT GA
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| Protein sequence | MSASRPVPHS DRGAAAPVQS APREAGLESR LDALCRSVAE IFAVPMAAIA LIDADRIRFR
ARYGLAEAVI DREDALCQHT IRQPRGHALV VSDLIRDERF VHSPLVVGAP HARFYAGLAI
RSGAGRVVGT LCLMDRVPRD DVSSDRVRVL QELALVAEAH LELDEARRAS EAAERRRAEA
HLLEWEARQR ALEAAHAMAE QIAAFGHWRI DAGTRTIAWS DGIARIFGRN AERATLPLET
HIGFYHPDDR ERVWAAMDEA LAGRSRTLGG GYEHRSRILR PDGEIRVVAV HGIGEHDEAG
RLVSIFGVCL DVTGMARSEQ RLRETGEAMR AALEAMDQGL VMIGPDDRVQ VHNQRVRDLL
ELPEDVLHEG VSYGAVRRFL GRRGEFVHAP PEAQEWLEHG DFPPGVQRYE GMRPNGTILE
VRHAPMASGG HICTFTDLTA SRQSEAALRS AEADYQSLFQ NAVIGVYRAR LDGGIVQANR
ALARLHGYGD ADLSLPEGGF SHDWYIEPGR HEAFLACLER EGHVEDFVSE VRRHAGGERI
WVSETAWVVR DAAGRPIWFE GTVADATERK RAQALIEHMA RHDALTGLPN RRLFQETLAR
EIDGARRDGG SVVVLCCDLD RFKAVNDTFG HPAGDALLRV IAGRLRATLR EGDVVARLGG
DEFAIILPSR GKQRRIAAFA RRLIQAAGRP VDLGGRATTV GVSIGVAVWP KHGDSADTLF
KNADIALYRA KDSGRNTFRF YESGMALAVV TRNLLEIEMR ESIRSGGFAL HYQPIFALAD
GAPQGFEALL RWNHPLRGPI SPGAFIPLAE ESGLITQLGA WALHEACREA ASWPGDLRVA
VNVSAVQFRK TGLEQSVMRA LAASGLPAGR LELEITESVL MQDSDAVIGS LHRLRAMGVR
IALDDFGTGY SSLSYLCRFP FDKIKIDRAF IRDIDEPVAA AVVRAVVGLG ERLGMAITAE
GVETEEQLVQ VRRKGCTEVQ GFLLGRPLPA AEAMTLVAGR VAA
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