| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_3286 |
|---|
| Symbol | |
|---|
| ID | 7117053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 3464042 |
|---|
| End bp | 3465100 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643526036 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_002422051 |
|---|
| Protein GI | 218531235 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGGAC AGATGCAGCA GGCGGATCCG GACCTCGACC GCGCTCTGGC TCCCGCGCAC
CGCGCCTGGG AGGCGCTGCG GCAGTATGCG CTGCCGCCCT CCCCGCGGAA CTACGAATTG
CTGCACACCT TCTTCGCCGG CGCCAATCCG CCGCTGAGCG AACGCCTCGC GGCCTGTCTG
GCACCCGGTG GAACGCTGAC CGAGGAGCAG GCGAGCGCGC TCTACGACGC CTGCATCGCC
GGGACCGCGA CAGAGGCCTC CGTGCTCGAT GGGGCGGGCC GGCTGGCGGA GGCGGCCGGT
ACCCTGGCCG AGCGCGTCGC GGGCAGTCGG AAGGCGCTCG CCGGCTATGG TGATGCCCTG
ACCCATTGGT CCGGCCGCCT GAATGCACGG CCGACCGCCG ATGAGCTGAT GACGGCGCTC
GTCGCCCTGA TCGGTGAGAC CGAGCAGGCG CAGACCCGCA ATCACCTGCT CGAGGAGCAG
CTCTCGGTCT CCGCCGCCCA CATCGCCAAG CTGCACAAGG ATCTCGTCGA GACGCAGCGC
GCGGCGGCGA CCGATGCCCT GACGGGGCTT GCCAACCGCA AGACCTTCGA CGGGTTCCTG
CGCGACTCGA TCGCCCGCAC CCGGAGCGAT TCCGGCAGCA CTTTCTCCCT GCTCATGCTC
GACATCGACC ACTTCAAGGG TCTCAACGAC CGGCACGGCC ACCGCTTCGG CGATCAGGTG
CTGCGCCTCG TCGGACGGCT GCTCAGCGCG AAGACGACGG ATCGCGACCT CGCCGCGCGC
TACGGCGGCG AGGAATTCGC GATCGTGCTC GGCGAGGCCG GCATCGGCGC CGGCGTCGCG
CTCGCCCAGG AGATCTGCGG CCGGCTGCGG GGTCAGCGGC TGGTCAAGCG CGGCACCGGC
GATGTCGTGG CACAGGTCAC GATCTCGGCT GGCGTCGCGC AATACAGGCC GGGCGAAGCC
GCCCGCGATG TGATCGAGCG GGCCGACCGC GCGCTCTACG AGGCCAAGCG GACCGGCCGC
GACCGTGTCT GCCCGACGCC GCGAGCTGCA GTCGCGTGA
|
|---|
| Protein sequence | MQGQMQQADP DLDRALAPAH RAWEALRQYA LPPSPRNYEL LHTFFAGANP PLSERLAACL
APGGTLTEEQ ASALYDACIA GTATEASVLD GAGRLAEAAG TLAERVAGSR KALAGYGDAL
THWSGRLNAR PTADELMTAL VALIGETEQA QTRNHLLEEQ LSVSAAHIAK LHKDLVETQR
AAATDALTGL ANRKTFDGFL RDSIARTRSD SGSTFSLLML DIDHFKGLND RHGHRFGDQV
LRLVGRLLSA KTTDRDLAAR YGGEEFAIVL GEAGIGAGVA LAQEICGRLR GQRLVKRGTG
DVVAQVTISA GVAQYRPGEA ARDVIERADR ALYEAKRTGR DRVCPTPRAA VA
|
|---|
| |