Gene Mchl_3236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3236 
Symbol 
ID7117575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3418319 
End bp3419845 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content70% 
IMG OID643525986 
Productphytoene desaturase 
Protein accessionYP_002422001 
Protein GI218531185 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID[TIGR02734] phytoene desaturase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.689878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGACAC TGGCCGTCAA ACCGACTGTC ACGTCCGGCC CCGATGCCCG GCCGCATGCG 
GTCGTGATCG GGGCCGGCTT CGGCGGGCTG GCCGCGGCGG TTCGGCTCGG CGCCCGCGGC
TATCGCGTCA CCGTTCTGGA ACGGCTCGAC CAGCCGGGCG GTCGCGCCCG CGTCCACCGG
CAGGACGGCT TCACCTTCGA TGCGGGGCCG ACCATCGTCA CCGCGCCGTT CCTGTTCGAG
GAGCTGTGGC GGCTGTGCGG GCGGGAGATG CGCGAGGACG TGACGCTCGT GCCGATGCAG
CCGTTCTACC GCATCCGCTT CGAGGACGGG CAAAGCTTCG CCTATAGCGG CGACCGCGCG
GCGATGCGGG CCGAGGTCGC CCGCTTCTCG CCCGAGGACG TGCCGGGCTA CGAGCGCTTC
ATGGCCCATA GCGAGGCCGT GTGCCGGATG GGCTTCGAGG AACTCGGCCA CGTCCCGTTC
GGCAACCTCG GCTCGATGCT GCGGATCGCG CCGGATCTGC TGCGCTTGTC GGGCCACCGC
AGCGTCTACA ACGTGGTGTC CCGCTTCATC CGCGACGAGC GGCTTCGCAC CATCTTCAGC
TTCCATCCCC TGCTCATCGG CGGCAACCCG TTTCGGGCCA GCGGCATCTA CTGCCTGATT
GCCCATCTGG AGCGGCAATG GGGCGTCCAC TTCGCCATGG GCGGTACCGG GCGGCTGGTG
GACGGTCTCT GCGGCTTGAT CTGGGGGCAA GGCGGCCGCG TCCGCTGCGG CGAGGAGGTT
GCGCGCATCC GCGTCGAGGA CGCGCGGGCG ACGGGCGTGG TGCTGGCGGG GGGCGAGGTC
ATCCCCGCCG ACATCGTCGT CTCGAACGCC GATTCCGCCT TCACCTACGG CACGCTGCTC
GGCGGCCGGA CCCGGCGCTG GAGCGCGCGG CGCCTGGCGC GCGCCTCGTC CTCCATGGGG
CTGTTCGTCT GGTATTTCGG CACCCGGAAG AAGTACCCGG AGGTCGATCA TCACATGATT
CTGATGGGCC CGCGCTATCG CGGCCTGTTG CAGGACATCT TCGACCGCAA GCACTTGGCG
GACGATTTCA GCCTCTACCT TCACCGCCCG ACCGCGACCG ACCCGCTGCT CGCCCCGCCG
GGGCATGACG CGTTCTACGT GCTCGCCCCG GTGCCGAACC TCGACGGCGG CCAGGATTGG
GCACAGCTTG CCGAGCCCTA CCGCCAGCGG ATCGCGCGCT TCCTCGAAGG ATCGGTGCTG
CCGGGGCTGT CGGACGCCCT CGTCACCTCG CGGGTGACGA CGCCGCAGGA CTTTTCCGAC
GACTTCCTGA GCTTCCGCGG CTCCGGGTTC GGGCTGGAGC CGGTGCTGAC GCAATCGGCG
TGGTTCCGTC CGCACAACCG CTCGGAAGAC GTGGCCAACC TCTTCCTCGT CGGCGCGGGG
ACGCATCCCG GCGCCGGTCT GCCGGGCGTG CTGTCCTCGG CGCGTGTCCT CGATTCCGTG
GTGCCGGATG CCCGTGTTTG CGCCTGA
 
Protein sequence
MLTLAVKPTV TSGPDARPHA VVIGAGFGGL AAAVRLGARG YRVTVLERLD QPGGRARVHR 
QDGFTFDAGP TIVTAPFLFE ELWRLCGREM REDVTLVPMQ PFYRIRFEDG QSFAYSGDRA
AMRAEVARFS PEDVPGYERF MAHSEAVCRM GFEELGHVPF GNLGSMLRIA PDLLRLSGHR
SVYNVVSRFI RDERLRTIFS FHPLLIGGNP FRASGIYCLI AHLERQWGVH FAMGGTGRLV
DGLCGLIWGQ GGRVRCGEEV ARIRVEDARA TGVVLAGGEV IPADIVVSNA DSAFTYGTLL
GGRTRRWSAR RLARASSSMG LFVWYFGTRK KYPEVDHHMI LMGPRYRGLL QDIFDRKHLA
DDFSLYLHRP TATDPLLAPP GHDAFYVLAP VPNLDGGQDW AQLAEPYRQR IARFLEGSVL
PGLSDALVTS RVTTPQDFSD DFLSFRGSGF GLEPVLTQSA WFRPHNRSED VANLFLVGAG
THPGAGLPGV LSSARVLDSV VPDARVCA