Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_3236 |
Symbol | |
ID | 7117575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | + |
Start bp | 3418319 |
End bp | 3419845 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643525986 |
Product | phytoene desaturase |
Protein accession | YP_002422001 |
Protein GI | 218531185 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.689878 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGACAC TGGCCGTCAA ACCGACTGTC ACGTCCGGCC CCGATGCCCG GCCGCATGCG GTCGTGATCG GGGCCGGCTT CGGCGGGCTG GCCGCGGCGG TTCGGCTCGG CGCCCGCGGC TATCGCGTCA CCGTTCTGGA ACGGCTCGAC CAGCCGGGCG GTCGCGCCCG CGTCCACCGG CAGGACGGCT TCACCTTCGA TGCGGGGCCG ACCATCGTCA CCGCGCCGTT CCTGTTCGAG GAGCTGTGGC GGCTGTGCGG GCGGGAGATG CGCGAGGACG TGACGCTCGT GCCGATGCAG CCGTTCTACC GCATCCGCTT CGAGGACGGG CAAAGCTTCG CCTATAGCGG CGACCGCGCG GCGATGCGGG CCGAGGTCGC CCGCTTCTCG CCCGAGGACG TGCCGGGCTA CGAGCGCTTC ATGGCCCATA GCGAGGCCGT GTGCCGGATG GGCTTCGAGG AACTCGGCCA CGTCCCGTTC GGCAACCTCG GCTCGATGCT GCGGATCGCG CCGGATCTGC TGCGCTTGTC GGGCCACCGC AGCGTCTACA ACGTGGTGTC CCGCTTCATC CGCGACGAGC GGCTTCGCAC CATCTTCAGC TTCCATCCCC TGCTCATCGG CGGCAACCCG TTTCGGGCCA GCGGCATCTA CTGCCTGATT GCCCATCTGG AGCGGCAATG GGGCGTCCAC TTCGCCATGG GCGGTACCGG GCGGCTGGTG GACGGTCTCT GCGGCTTGAT CTGGGGGCAA GGCGGCCGCG TCCGCTGCGG CGAGGAGGTT GCGCGCATCC GCGTCGAGGA CGCGCGGGCG ACGGGCGTGG TGCTGGCGGG GGGCGAGGTC ATCCCCGCCG ACATCGTCGT CTCGAACGCC GATTCCGCCT TCACCTACGG CACGCTGCTC GGCGGCCGGA CCCGGCGCTG GAGCGCGCGG CGCCTGGCGC GCGCCTCGTC CTCCATGGGG CTGTTCGTCT GGTATTTCGG CACCCGGAAG AAGTACCCGG AGGTCGATCA TCACATGATT CTGATGGGCC CGCGCTATCG CGGCCTGTTG CAGGACATCT TCGACCGCAA GCACTTGGCG GACGATTTCA GCCTCTACCT TCACCGCCCG ACCGCGACCG ACCCGCTGCT CGCCCCGCCG GGGCATGACG CGTTCTACGT GCTCGCCCCG GTGCCGAACC TCGACGGCGG CCAGGATTGG GCACAGCTTG CCGAGCCCTA CCGCCAGCGG ATCGCGCGCT TCCTCGAAGG ATCGGTGCTG CCGGGGCTGT CGGACGCCCT CGTCACCTCG CGGGTGACGA CGCCGCAGGA CTTTTCCGAC GACTTCCTGA GCTTCCGCGG CTCCGGGTTC GGGCTGGAGC CGGTGCTGAC GCAATCGGCG TGGTTCCGTC CGCACAACCG CTCGGAAGAC GTGGCCAACC TCTTCCTCGT CGGCGCGGGG ACGCATCCCG GCGCCGGTCT GCCGGGCGTG CTGTCCTCGG CGCGTGTCCT CGATTCCGTG GTGCCGGATG CCCGTGTTTG CGCCTGA
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Protein sequence | MLTLAVKPTV TSGPDARPHA VVIGAGFGGL AAAVRLGARG YRVTVLERLD QPGGRARVHR QDGFTFDAGP TIVTAPFLFE ELWRLCGREM REDVTLVPMQ PFYRIRFEDG QSFAYSGDRA AMRAEVARFS PEDVPGYERF MAHSEAVCRM GFEELGHVPF GNLGSMLRIA PDLLRLSGHR SVYNVVSRFI RDERLRTIFS FHPLLIGGNP FRASGIYCLI AHLERQWGVH FAMGGTGRLV DGLCGLIWGQ GGRVRCGEEV ARIRVEDARA TGVVLAGGEV IPADIVVSNA DSAFTYGTLL GGRTRRWSAR RLARASSSMG LFVWYFGTRK KYPEVDHHMI LMGPRYRGLL QDIFDRKHLA DDFSLYLHRP TATDPLLAPP GHDAFYVLAP VPNLDGGQDW AQLAEPYRQR IARFLEGSVL PGLSDALVTS RVTTPQDFSD DFLSFRGSGF GLEPVLTQSA WFRPHNRSED VANLFLVGAG THPGAGLPGV LSSARVLDSV VPDARVCA
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