Gene Mchl_3193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3193 
Symbol 
ID7114192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3373925 
End bp3374338 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content73% 
IMG OID643525944 
Productcytidine deaminase 
Protein accessionYP_002421959 
Protein GI218531143 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0295] Cytidine deaminase 
TIGRFAM ID[TIGR01354] cytidine deaminase, homotetrameric 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0570235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.552926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGC CCGATCTCGA TGCCCTGTTC GCGGCGGCCA CCGCCGTGCG CGCACGGGCC 
CATGCGCCCT ATTCGGGCTT CGCCGTCGGC GCCGCCTTGG TGGATGACGC GGGCGGCGTC
CATGCCGGCT GCAACGTCGA GAACGCCGCC TACCCCGTCG GCACCTGCGC CGAGGCCGGC
GCCATCGCCG CGATGATCGC GGCCGGCGGA CGGCAGATCC GGGCGATCCT CGTTCTCGCC
GATAGTCCCG CCCCGGTGAC ACCCTGCGGC GCCTGCCGCC AGCGCATCCG GGAATTCGCG
GGTCCCGACA CGCCGATCGT CTCGGCCGGT CCCGACGGCG TGCGGGCGCG CTACACGCTG
GAGCAATTGC TGCCCGCCTC CTTCGGCCCG GAGCATTTCG TCCATGGCAC CTGA
 
Protein sequence
MTEPDLDALF AAATAVRARA HAPYSGFAVG AALVDDAGGV HAGCNVENAA YPVGTCAEAG 
AIAAMIAAGG RQIRAILVLA DSPAPVTPCG ACRQRIREFA GPDTPIVSAG PDGVRARYTL
EQLLPASFGP EHFVHGT