Gene Mchl_3107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3107 
Symbol 
ID7118385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3287750 
End bp3288481 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content72% 
IMG OID643525858 
Productputative periplasmic ligand-binding sensor protein 
Protein accessionYP_002421873 
Protein GI218531057 
COG category[S] Function unknown 
COG ID[COG3416] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.335177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.047306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCG AAGAACGCGA CATCATCAAC GGCATCTTCC AGCGGCTCGA ACAGGCGTCC 
GGACAGGCCC GCGACGCCGA TGCGGAGCGC TTCATCGCCG AGAAGCTTCG CAACCAGCCC
TACGCGCCCT ACGCCATGGC GCAGCTCATC TACGTGCAGG AAGAGGCGAT CAAGAGCCTC
AACCAGCAGC TCGAACAGGC CCGCGAGCAG GCTCAGTCCC AGCCGGCCGG CGGCGGTGGG
TTCCTGTCGA GCATCTTCGG CGGCGGACAG CGTTCCGAGC CGCAGCGTCC CGGCGGACAG
GCTTGGGGCC AGCAGGGTGG CTACGGTCAG CAAGGCGGGT ATGGTGGTCC GCAGGGCGGC
CCGCAGCAGG GCTATGGTGG CGCTCCGCAG GGCGGACCCT GGGGCGGCCA GCCTCAGCAG
CCCGCACGCG GCGGCGGCTT CCTGGCCACG GCCCTGCCGA TGGCGGCGGG CGCAGCGGGC
GGCATGCTGC TCGGCAGCGC GCTCTCCAAC GCCTTTGCCG GCGGCCACTC CCAGCTCGGC
AGCGCCTCGG CGGCAGGTTT GACCGGCGGT GAGACGGGCG GCGGCATGTT CGGTGGCGGC
GGCGGCGATC AGGATCTCGG GTCGGCGCTC GGCGGCAGCG ATGGCGGCTT CCAGGACGCT
TCGTTCGGCG GCGGTGGCGG CGATGATTTC GGCGGCGACC TCGGTGATGG CGGCGACGAC
GACTGGGCCT GA
 
Protein sequence
MNSEERDIIN GIFQRLEQAS GQARDADAER FIAEKLRNQP YAPYAMAQLI YVQEEAIKSL 
NQQLEQAREQ AQSQPAGGGG FLSSIFGGGQ RSEPQRPGGQ AWGQQGGYGQ QGGYGGPQGG
PQQGYGGAPQ GGPWGGQPQQ PARGGGFLAT ALPMAAGAAG GMLLGSALSN AFAGGHSQLG
SASAAGLTGG ETGGGMFGGG GGDQDLGSAL GGSDGGFQDA SFGGGGGDDF GGDLGDGGDD
DWA