| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_3085 |
|---|
| Symbol | |
|---|
| ID | 7118363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 3267061 |
|---|
| End bp | 3267576 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643525836 |
|---|
| Product | TspO and MBR like protein |
|---|
| Protein accession | YP_002421851 |
|---|
| Protein GI | 218531035 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.424495 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAC TGGACATCCC CGAGCGGCCG GCCCTGCCGC CGATCCCGCG GCTTGCCGCC
GCGATCCTCC CCGTCCTCCT GGTGACGGCG GTGGGGTCGC TCTCGACCGG CGCCAATATC
GAGGAGTGGT ACACGACGAT CCGCAAGCCG GCCTTCAACC CGCCGAACTG GGTGTTTCCG
CTGGCTTGGA CCGTCCTCTA CACCCTGATC GCCGTCTCGC TCTGGCGGCT GCTCGGCGCG
CGCCCGGTGC CGGGGCCGGC CCGGAAGGCC TGGTGGTTGG CGCTCGCCGC CTTCGGCGCC
CAGCTCGTCC TCAATGCGGC CTGGACACCG GTCTTCTTCG CTGCCCACCA ACTCGGCCTC
GCGCTGATCG TCGCGCTCGC CATGCTCGTG ATGATTCTGT GGACGATCCG CCTCTCCTGG
CGCTTCGACC GGGCCGCAGC GTGGCTGCTC GTGCCCTATG CCGCCTGGGT GGCGTTTGCT
TGCCTGCTCA ACGGAACGAT CTGGCAGATG AACTGA
|
|---|
| Protein sequence | MSALDIPERP ALPPIPRLAA AILPVLLVTA VGSLSTGANI EEWYTTIRKP AFNPPNWVFP
LAWTVLYTLI AVSLWRLLGA RPVPGPARKA WWLALAAFGA QLVLNAAWTP VFFAAHQLGL
ALIVALAMLV MILWTIRLSW RFDRAAAWLL VPYAAWVAFA CLLNGTIWQM N
|
|---|
| |