| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_3049 |
|---|
| Symbol | |
|---|
| ID | 7118327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 3221499 |
|---|
| End bp | 3223898 |
|---|
| Gene Length | 2400 bp |
|---|
| Protein Length | 799 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643525800 |
|---|
| Product | PAS/PAC sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002421815 |
|---|
| Protein GI | 218530999 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.70723 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTTC TGTCGCGACG TTCTGAAAAC GTGCCGTCCG ATGCCCCGTC CCCCGAGGAC
GGCGCCGAGG CGGTCGCGCG CCGGTTCGAC TCGCCCCCCC GCGGGCCGGG CTGGATCGGG
GCGGCGGTGG TGCTCACGGC GCTGATTTCC GCCTCGGTCA CCTTCCTCAT CCTCGCCGGC
ATCATCCAGA TCACGCGGAC GCCGACGACC GGCGTGGCCT TGCTCTCGGT CAACGCCGCG
CTCGTTCTCG CGCTGGTCGT CGTGATTGCC TGGGAGGCGC GGGTCTTCCT GCATGCCCGG
CGCACCCACG CCTCGGTGGC GCGGCTGCAC ACCCGAATCG TCGGCCTGTT CAGCCTGATC
GCGATCCTGC CGACGATCCT GCTCGCCATC GTCGCCTCGG TGACGATCGA TGTCGGCCTG
TCGCTCGGCT TCACCGACCG CGTCCGCGAC GTGGTGCTGA AATCGGTGCA GGTCGCGGAC
GCCTACCAGG AGAATCACTG CCAGTCGCTC GCCCGCGAAA TCCGCATCTT CGCCGACGAC
CTGACGCGGG CGCGGCCGAA TTTCGACGTG AACCGCGAGT GGTTCGAGGG CTTCATGACC
ACCCGCGCCC AGGCGCTCGG CCTGCCGATC GTCAAGATCA TGCGCGGGCC GAACGAGGTG
GTGGCGCGCG CCAATATCGA TGTGCTCAAG CAGACGCGGC TGCCCTCGGC CGCGGCCTTC
GAGGATGCGG CGAAGTCGAG CGACCCGATC TGCCTGCTGC CGAATGAGGG CCGGGTCTTC
GCCGCCCTGA TGCGGATGCC GGCCTACGAC AACGCCGTGC TGCTGGTGCA GCGCGAGGTG
AGCCAGCTCG CCATCGACTT TCCCGGTGTC GCCCGCGCCG CGGCGGCCGA GTACCTGACC
TTCGACGAGC TGCGCCGTTA CGTGCAGATC GCCTTCGCCT CGGTCTTCAT CCTGATCGCC
CTGATCACGC TGCTCTCGGC GGTCTGGTTC GGGCTGAACT TCGCCAACCG TTTCGTCGCC
CCGATCCGTC GGCTCATCAA CGCCGCCGAC GAGGTTGCCG CGGGCAATTT CTACGCCCGC
GTTCCGGCGC GCAAATCCGA CGGCGATCTC GCCCATCTCG GCGAGAGCTT CAACACGATG
ACGCAGGAGC TGCGCCGCCA GCACGATGGC TTGCGGGCGG CCAACGACCT GATCGACCGC
CGTCGCCGCT TCACCGAGGC CGTGCTGTCA GGCGTTTCGC CCGGCGTGCT CGGCGTCGAT
GCCGACGGCG TCATCACCAT CGCCAATCCG GGCGCGGAGC GGACGCTGGG CCTGACAGCC
AAGGAGCTCG TCGGGCAGCC TTTGACGAAT GTCGTGCCGG AGATCGCCGC ACTGTTCCCG
GAAGCGGAGG GACGCCACCG CGCCCTGCAG CAGCAGATCC AGCTCGTACG CGGCGGCCGC
GAGCGCACGA TTGCCGTCCG CGTCACCAGC GAGCAGGCGC AGGGCGAGGC GCGCGGCTAC
GTCGTCACGC TGGACGACAT CACCGATCTC GTCACGGCGC AGCGCACCTC CGCCTGGGCC
GACGTGGCCC GCCGCATCGC CCACGAGATC AAGAACCCGC TGACCCCGAT CCAGCTTTCG
GCCGAGCGCA TCCGGCGGAA GTACGGAAAA GTGATCACGA CCGACAAGGA CGTGTTCGAG
CAGTGCACCG CCACGATCGT GCGGCAGGTG GACGAGATCA AGCGGATGGT GGACGAGTTC
TCCTCCTTCG CCCGGATGCC GAAGCCCGCG ATTACGCAGC AGGATCTGGC TGAGATCGCG
CGCCAGAACC TGTTCATGCT GCGCATGGCG CATCCCGACC TCGATTTCCC CTTCGACACG
GTCGGTGCCG ACGAGAAGGG CCGCGTCGTC GCCGCCTTCG ACGTGCGGCT GTTCTCCCAG
GCGCTCACCA ACATCCTCAA GAACGCCGTC GAGGCGGTTC AGGCGGTGCC GGAGGACGTG
CTGACGGCCG ATGGCGGCAA GGGCCGGGTC GCCCTGACGC TGGTCGTCGA AGAGGTCTTC
GTGGTGATCG AAGTCACCGA TAACGGAAAA GGCTTTCCGG CAGAGGGGCG CCAGCGCTTG
CTCGAACCCT ATATGACGAC CCGCGAGGGC GGGACCGGCC TCGGACTCGC GATCGTTTCC
AAGGTGCTCG AAGAGCATGG CGGGGGGATC GAGCTGAACG ACAACCCGGA GGGGCGCGGC
GGACAGGTCC GCATGCGGCT GCCGCGGGAA GTCGGACGGC CGGACGAACG GAATTCCGGG
ACCGGTGCGG GACAGGAGCG GGATCGCTCC GCGGCACCGG GCGCGCGTGA CAGGACAACG
ATGGATAAGA ATACGGAGGA CGCCATGGAA GCGCGACGCG TCGCGGAGGT GCAGCCATGA
|
|---|
| Protein sequence | MPLLSRRSEN VPSDAPSPED GAEAVARRFD SPPRGPGWIG AAVVLTALIS ASVTFLILAG
IIQITRTPTT GVALLSVNAA LVLALVVVIA WEARVFLHAR RTHASVARLH TRIVGLFSLI
AILPTILLAI VASVTIDVGL SLGFTDRVRD VVLKSVQVAD AYQENHCQSL AREIRIFADD
LTRARPNFDV NREWFEGFMT TRAQALGLPI VKIMRGPNEV VARANIDVLK QTRLPSAAAF
EDAAKSSDPI CLLPNEGRVF AALMRMPAYD NAVLLVQREV SQLAIDFPGV ARAAAAEYLT
FDELRRYVQI AFASVFILIA LITLLSAVWF GLNFANRFVA PIRRLINAAD EVAAGNFYAR
VPARKSDGDL AHLGESFNTM TQELRRQHDG LRAANDLIDR RRRFTEAVLS GVSPGVLGVD
ADGVITIANP GAERTLGLTA KELVGQPLTN VVPEIAALFP EAEGRHRALQ QQIQLVRGGR
ERTIAVRVTS EQAQGEARGY VVTLDDITDL VTAQRTSAWA DVARRIAHEI KNPLTPIQLS
AERIRRKYGK VITTDKDVFE QCTATIVRQV DEIKRMVDEF SSFARMPKPA ITQQDLAEIA
RQNLFMLRMA HPDLDFPFDT VGADEKGRVV AAFDVRLFSQ ALTNILKNAV EAVQAVPEDV
LTADGGKGRV ALTLVVEEVF VVIEVTDNGK GFPAEGRQRL LEPYMTTREG GTGLGLAIVS
KVLEEHGGGI ELNDNPEGRG GQVRMRLPRE VGRPDERNSG TGAGQERDRS AAPGARDRTT
MDKNTEDAME ARRVAEVQP
|
|---|
| |