Gene Mchl_3046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3046 
Symbol 
ID7118324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3217054 
End bp3218187 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content69% 
IMG OID643525797 
Productsignal transduction histidine kinase, nitrogen specific, NtrB 
Protein accessionYP_002421812 
Protein GI218530996 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.823281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTTT CCGACGAGCC CGCCCCCGAA TCCCTGCCGC CGGCCGAGGC GGTGCTGAAC 
TCGCTGCCGC TGCCGGTCCT CACCATCGGG CCGGACGAGC GGATCCTGCG GGTCAACCAC
GCCGCCGAGC TGTTCTTCGA CGCCTCGGCC CGGCTGATGC TGCGCGGGCG GCTGCGCGAC
ATCATCCCGT TCTCCTCGCC GATCATCGCG CTGGTGACCG AGGTGCGCCG CCGCCGCTCC
TCCGTGTCGG AATACCGGGT CGAGCTGGTC CAGCCCCGCT CGGGGACCGA GCGCAGCGTC
GATGTCTTCG CCACGCCGCT GCGCGACGAG GACGATTCGG TAGTGCTGAT GCTTCAGGAG
CGCACCATCG CCGACAAGAT GAACCGGCAG CTCACCCATC GCGGTGCCGC GCGCTCGATG
GTGGCGCTCG GCGCGATGCT CGCGCACGAG ATCAAGAACC CGCTCGCCGG CATCCGCGGC
GCGGCGCAGC TCCTCGAACA GGAGAGCGAC GAGGAGGACC GGCTTCTGAC CCGCCTGATC
TGCGACGAGT CGGACCGGAT CGTGCGCATC GTCGAGCGGA TGGAGCTGTT CGGCGACGAG
CGGCCGGTGG AGCGCGGCCC CGTCAACGTC CACGGCGTGC TCGATCAGGT GAAGCGCTCG
GCCCAGTCGG GCTTTGCCCG TCACATCCGC TTCGTCGAGA ACTACGATCC CTCGCTGCCG
CCCGTCCTCG GCAACAGGGA CCAGTTGATC CAGGTGATCC TGAACCTCGT GAAGAACGCG
GCCGAGGCGA TCGGCACGGA CACGGTCGAG GGCGAGATCA CCCTCTCCAC GGCCTTCCGC
ACCGGCCTGC GCCTCCAGAT TCCCGGCTCG CGCGAGCGTG TCAGCCTGCC GATCGAAGTG
GCGGTGCGCG ACAACGGGCC GGGCATCCCG CCCGACATGC TGTCGGACCT GTTCGACCCC
TTCGTCACCA CCAAGGTGCA GGGCTCCGGC CTCGGACTTG CATTGGTGGC CAAGATCGTC
GGCGACCATG GGGGCATCGT CGAATGCGAT CCCGTACCCC GCCGCACCGC CTTCCGGATC
CTCCTTCCCA TGTCGAGCGC CCGCGACGGG CGTGAATCGG CCGCGGAGCG CTGA
 
Protein sequence
MPFSDEPAPE SLPPAEAVLN SLPLPVLTIG PDERILRVNH AAELFFDASA RLMLRGRLRD 
IIPFSSPIIA LVTEVRRRRS SVSEYRVELV QPRSGTERSV DVFATPLRDE DDSVVLMLQE
RTIADKMNRQ LTHRGAARSM VALGAMLAHE IKNPLAGIRG AAQLLEQESD EEDRLLTRLI
CDESDRIVRI VERMELFGDE RPVERGPVNV HGVLDQVKRS AQSGFARHIR FVENYDPSLP
PVLGNRDQLI QVILNLVKNA AEAIGTDTVE GEITLSTAFR TGLRLQIPGS RERVSLPIEV
AVRDNGPGIP PDMLSDLFDP FVTTKVQGSG LGLALVAKIV GDHGGIVECD PVPRRTAFRI
LLPMSSARDG RESAAER