Gene Mchl_3027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3027 
Symbol 
ID7118224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3195931 
End bp3196950 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content66% 
IMG OID643525778 
Productlipoyl synthase 
Protein accessionYP_002421793 
Protein GI218530977 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0320] Lipoate synthase 
TIGRFAM ID[TIGR00510] lipoate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.282591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.443203 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTTG TCCTCGATCT CCTGAACAAA GACACCCGGC CGAAGCTGGA TGCGCCCGCG 
CGTCCGCGCC ATCCCGAGAA GGCGCACCGG CCGGACACTG CCATTCAGCG CAAGCCGGAC
TGGATCCGGG TGAAGGCACC GGGCTCGAAG CTCTGGGCCG AGACCAAGGA CATCGTCCGC
GCCAACAACC TCGTCACGGT CTGCGAGGAA GCGGGCTGCC CCAATATCGG TGAGTGCTGG
GAAAAGCGGC ACGCCACCTT CATGATCATG GGTGACACCT GCACCCGCGC CTGCTCGTTC
TGCAACGTGC GCACGGGCTT GCCAGCGGCG CTCGACGAGG CCGAGCCGGA GAAGGTCGCC
GAGGCGGTGG CCAAACTCGG ACTGCACCAC GTCGTCGTCA CCTCGGTCGA TCGCGACGAC
CTCAAGGATG GCGGCGCCGA GCATTTTTCG CGCACCATTG CCGCGATCCG ACGGGCGAGC
CCCGGCACCA CCGTCGAGAT CCTGACGCCC GACTTCCTGC GCAAGCCCGG CGCCCTGGAA
GTCGTGGTCG CGGCCAAGCC CGACGTGTTC AACCACAATA TGGAGACTGT GCCCGGCAAG
TACGTGACCG TGCGGCCCGG TGCCCGCTAC TTCCACTCGG TGCGCCTGCT GCAGCGGGTG
AAGGAGCTCG ATCCGACGAT CTTCACCAAG TCCGGCATCA TGGTCGGGCT GGGCGAGGAA
CGGAACGAGG TCGTGCAACT CATGGACGAT CTGCGTTCGG CGGAGGTCGA CTTCCTCACC
ATCGGCCAAT ATCTGCAACC GACCCGCAAG CACCATGAGG TCGTGCGCTT CGTGCCGCCG
GACGAGTTCA AAGCCTACGA GACCACGGCC TATGCCAAGG GCTTCCTGCT GGTCTCGGCG
ACGCCGCTCA CGCGCTCGTC GCATCACGCC GGCGAGGATT TCGCCCGGCT GAAGGCGGCT
CGTCTGGCCA AGCTCGGACC CGCGCCGGTG GCTGCCAGCA TCCGCGCCGT CAACGCCTGA
 
Protein sequence
MAVVLDLLNK DTRPKLDAPA RPRHPEKAHR PDTAIQRKPD WIRVKAPGSK LWAETKDIVR 
ANNLVTVCEE AGCPNIGECW EKRHATFMIM GDTCTRACSF CNVRTGLPAA LDEAEPEKVA
EAVAKLGLHH VVVTSVDRDD LKDGGAEHFS RTIAAIRRAS PGTTVEILTP DFLRKPGALE
VVVAAKPDVF NHNMETVPGK YVTVRPGARY FHSVRLLQRV KELDPTIFTK SGIMVGLGEE
RNEVVQLMDD LRSAEVDFLT IGQYLQPTRK HHEVVRFVPP DEFKAYETTA YAKGFLLVSA
TPLTRSSHHA GEDFARLKAA RLAKLGPAPV AASIRAVNA