Gene Mchl_3008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3008 
Symbol 
ID7118205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3179924 
End bp3180772 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content69% 
IMG OID643525759 
Product2-dehydro-3-deoxyphosphooctonate aldolase 
Protein accessionYP_002421774 
Protein GI218530958 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 
TIGRFAM ID[TIGR01362] 3-deoxy-8-phosphooctulonate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.111529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.139812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAGA CCGCACAGAC TTCCGGTTCC GTCGTCCAGA CCGGCGGCGT CGCCTTCGCC 
AACCATCTTC CGCTGGCGCT GATCGCCGGC CCGTGCCAGC TCGAAGGGCG AAATCACGCC
CTCGAAATCG CTGCCGCTCT CAAGGAGATG GCGGCCAAGC TCGGCATCGG CCTCGTGTTC
AAGTCGTCCT TCGATAAGGC CAACCGTACC TCCGGCCGTA CCGCCCGGGG CGTTGGCCTC
GACGAGGCGC TTCCGGTCTT CGCCGAGATC CGCGAGAGCC TCGGGCTTCC CGTGCTCACC
GACGTGCACG AGGCCGAGCA TTGTGCGCGG GCGGCGCAAG CCGTCGACAT CCTGCAGATC
CCGGCCTTCC TCTGCCGCCA GACCGACCTC TTGCTCGCCG CCGCCGCCAC CGGGCGGGCG
GTCAACGTCA AGAAGGGGCA GTTCCTCGCG CCCTGGGATA TGGCCCATGT CGCGGCCAAG
GTGACCGAGG CCGGCAACCC CAACGTCATC GTCACCGAGC GCGGCGCCTC CTTCGGCTAC
AACACGCTCG TCTCCGACAT GCGCTCGCTG CCGATCATGG CCCGCGTCAC CGGCGGCGCA
CCGGTGGTGT TCGATGCAAC GCACTCGGTG CAGCAGCCGG GCGGGCAGGG CACCACCTCC
GGCGGACAGA GGGAGTTCGT CGCGGTGCTC GCCCGCGCCG CGGTGGCGGT CGGCGTGGCG
GGCGTGTTCA TCGAGACCCA TCCCGATCCC GACCGCGCGC CCTCCGACGG GCCGAACATG
GTGGCCTTGG CCGATCTGCC CGCTTTGATC GAGACCCTCA TGGCGTTCGA CCGTCTCGCC
AAGGCGTAA
 
Protein sequence
MPETAQTSGS VVQTGGVAFA NHLPLALIAG PCQLEGRNHA LEIAAALKEM AAKLGIGLVF 
KSSFDKANRT SGRTARGVGL DEALPVFAEI RESLGLPVLT DVHEAEHCAR AAQAVDILQI
PAFLCRQTDL LLAAAATGRA VNVKKGQFLA PWDMAHVAAK VTEAGNPNVI VTERGASFGY
NTLVSDMRSL PIMARVTGGA PVVFDATHSV QQPGGQGTTS GGQREFVAVL ARAAVAVGVA
GVFIETHPDP DRAPSDGPNM VALADLPALI ETLMAFDRLA KA