| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_2997 |
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| Symbol | |
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| ID | 7118193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | + |
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| Start bp | 3166032 |
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| End bp | 3167921 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643525747 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002421763 |
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| Protein GI | 218530947 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.127618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGCAT CAGCGCTGGA AGCTCCCTCG GTTTACGGCC CCGCCTTCGA TGAGAATCGC
GAGGCGATGC TGCTGTTCGA GCCCCTGCCG GACCGCATCG ATGATGCCAA CGCGGCGGCT
GCCCGGCTGC TCGGCCACGA CCGCGCGGCT CTGCGGGCGA TGCCCGTGAG CGCCCTGCAT
CCCAAACAGC GGCCTGCGCT CGTGGTGTTC ACCCAGGCCG TCCTCGCCGA GGGGCAATGG
TGGACACAAG GACTCACGCC GCGCCACGGC GCCGGCAAGT CGCTGCGCCT CGAATATGCC
GGCTGCGTGC TCTCGGGCGA GCCGACGCGG CTCCTCGTGA CCCTCTTCGA TCTCGATGAG
CGCGAGCGCC GCCGCATCGA CCGGGAGGCC GAGGCCCACA TGCGCGCCGG CCTGCCCGAA
TGGCAGCGCA TGGAGCGCAT CTTTCGCGAC ATCGAGCGCG GCAACCGGCT GATCCTGCGC
GCGGCGGGGG AGGGGATCTA CGGCGTCAAC GCGGACGGGA TCACCACCTT CGTCAACCCG
GCCGCGGAGC GGATGCTGGG ATGGGCCTCG GCCGATCTCG TCGGCAAGGA CATGCACGCC
ACCGTCCACC ATACCCACGC GGGCGGTGCG CATTACCCGC ATCACGACTG CCCGATCTAC
GCGGCCTTCC GCGACGGGGC CGTGCATCAG GTCGATGGCG AGGTGTTCTG GCGCAAGGAC
GGCACCTGTT TCCCCGTCGA GTACACCTCG ACGCCGATCC GCGAGGGCGG GCAATTGCTC
GGCGCGGTGA TCGTGTTTCG CGATGTCAGC CAGCGCCGTG AGGACGAGGA CCGGTTGCGG
GCCGCACTCG CCGAAGTCGA TTCCCTGCGC GAGCGCCTGG AGCAGGAGAA CGCCTACCTG
AAGGAGGAGA TTCGCGCCGA GAGCCACCAT CAAGGCATCA TCGGGCGTAG CCCGGTCATG
GAGGCGTTGC TGCGCCAGAT CGATGTGGTC GCGGGCACCG ATGCCACCGT CCTCGTCACC
GGCGAATCCG GCACTGGCAA GGAGTTGATC GCCCGGGCCA TCCACGAGGC GAGCCGCCGC
CGCGAGCGGC CGCTGATCCG CGTGAACTGC GCAGCGATCC CGCGCGACCT GTTCGAGAGC
GAGTTCTTCG GCCACGCCAA GGGCGCCTTC ACCGGAGCGC TGCGCGACCG GATCGGGCGC
TTCGAACTCG CCGACGGCGG CACGCTGTTC CTCGACGAGG TCGGGGAGAT CCCGCTCGAC
CTCCAGGGCA AGCTGCTGCG CGTCCTGCAA GAGCGCCAGT TCGAACGGGT CGGCGAGGAG
CGCACCCGCG CCGTCGACAT CCGGCTGATC GCCGCGACCA ACCGCGACCT CAAGGAGGAG
GTGCGCCGCG GGCGTTTTCG CGAGGATCTC TACTTCCGCC TCAACGTGTT CCCCCTGACC
TCCGCGCCCC TACGGGAGCG CCGCGAGGAC GTGCCGCTGA TCGCGCAGCA CGTCCTGAAG
GCCGCCGCGC GGCGCCTCAA CCGGACGGAT CTGCGCTTGA CCGAGGCCGA CGCCCGCCGC
CTGTCCCGCT ACGATTGGCC GGGCAACGTG CGCGAGCTGG AGAACGTGAT CGAGCGCGCC
GCGATTCTCG CCGAACGCGG GCGCCTGCGC TTCGATCTGC CGGAAACCCG CAGCACGGGT
CCCGTCACGC CCGCGCCGGA GCGCCCGGCG GATTTCGGCC GGCCGCTATC CGAAGAGGAG
CGCCGCGCCC GTGCCCGCAG CGAGATCGAG GCGGCGCTTC ACATCAGCGG CGGAAAGGTC
TTCGGTGCCG GCGGCGCGGC CGAGCTGCTC GGGCTCAAGC CGACGACGTT GCGCTCGCGG
ATGAAGGTGC TGGGGATCGA ACCGCTCTGA
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| Protein sequence | MSASALEAPS VYGPAFDENR EAMLLFEPLP DRIDDANAAA ARLLGHDRAA LRAMPVSALH
PKQRPALVVF TQAVLAEGQW WTQGLTPRHG AGKSLRLEYA GCVLSGEPTR LLVTLFDLDE
RERRRIDREA EAHMRAGLPE WQRMERIFRD IERGNRLILR AAGEGIYGVN ADGITTFVNP
AAERMLGWAS ADLVGKDMHA TVHHTHAGGA HYPHHDCPIY AAFRDGAVHQ VDGEVFWRKD
GTCFPVEYTS TPIREGGQLL GAVIVFRDVS QRREDEDRLR AALAEVDSLR ERLEQENAYL
KEEIRAESHH QGIIGRSPVM EALLRQIDVV AGTDATVLVT GESGTGKELI ARAIHEASRR
RERPLIRVNC AAIPRDLFES EFFGHAKGAF TGALRDRIGR FELADGGTLF LDEVGEIPLD
LQGKLLRVLQ ERQFERVGEE RTRAVDIRLI AATNRDLKEE VRRGRFREDL YFRLNVFPLT
SAPLRERRED VPLIAQHVLK AAARRLNRTD LRLTEADARR LSRYDWPGNV RELENVIERA
AILAERGRLR FDLPETRSTG PVTPAPERPA DFGRPLSEEE RRARARSEIE AALHISGGKV
FGAGGAAELL GLKPTTLRSR MKVLGIEPL
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