Gene Mchl_2950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2950 
Symbol 
ID7115757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3112201 
End bp3113667 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content70% 
IMG OID643525700 
Productsignal recognition particle-docking protein FtsY 
Protein accessionYP_002421717 
Protein GI218530901 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0552] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00064] signal recognition particle-docking protein FtsY 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.260236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00455351 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGACG ACGAGAAGCC CGGCTGGTTC GGACGCCTGT TCGGGCGAAA GGGCGCGCCC 
GAATCCAAGT CCCCCGAGCC GGTGCCGGCC GAGGACGCAG CGGCCGAGGA AACGCCGGCT
GAGGAAACGG TCACGCCGGA TCCGCTGTCG CCAGCCTCCG AATCCGAGGG GCAGCCGGTC
TTCACCACCG CGGCGGACGA CGTCGCCCAC GTGCCGCCGG CGGTAAGCGA GCCCGCGCCG
GACGATCCCG ACAAGAATCG CATCCCCGAT GAACTGGAGG GCGCCGACCT CCAGCCCGAG
CCGCAGCCGC CATCCGGCGA AGCACCGCAG CCCGACGAGA TTTCGGCCGA GAGCGAACCG
GCGCCCGCCC CCACCGAGAC GGCTGAGAAG CGGAACTGGT GGTCGCGCCT GACCGGCGGC
GAGGAGGAGA CGCCTGCGCC CGCGGCCGAA TCCGAACCAC CCGCCGAGGT CGATATCCAG
CCGGTCGATT CCGCGGCGGC GCTCGCGAGC GATGCGGTGT CCGGCGCCGT CGAGGGCAGC
GAGAAGCAGG GCTGGTGGTC GCGCCTGACC GCCGGAATGC GGCGCACCTC CTCCGCGCTG
TCGGACCGGG TGACGGGCCT GTTCACCAAG CGCAAGCTCG ATGCGACCAC CTTGGAGGAT
CTGGAAGACG CGCTGATCCA GGCCGATTTC GGCGTGGAGA CGGCGACACG GATGTCGGAG
GCGGTCGGCA AGGGCCGCTA CGAGAAGGGC ATCTCGCCCG ACGAGGTCCG TGCCATCCTC
GCCACCGAGA TCGAGCGGGC GCTGGAGCCG GTGGCGCTGC CGATCGAGAT CGATTCGGCC
AAGAAGCCCT ACGTGATCCT GACGGTCGGC GTGAACGGCG CCGGCAAGAC GACGACGATC
GGCAAGCTCT CGCTCAAGTT CAAGGCGGAA GGGCGCAGCG TCATGCTGGC GGCGGGCGAC
ACGTTCCGCG CGGCGGCGAT CGAGCAGTTG CGGGTGTGGG GCGACCGCAC CGGCACGCCG
GTCATCAGCC GAGCGCAGGG CTCGGATGCG GCGGGGCTCG CCTTCGACGC GTTCAAGGAG
GCACGGGAGA ACGGCACCGA CGTACTCCTC ATCGACACCG CCGGCCGCTT GCAGAACAAG
GCGGGGCTGA TGGCGGAGCT GGAAAAGATC GTCCGGGTCA TCCGCAAGCT CGATCCGGAA
GCGCCGCACG CCACCCTGCT GGTGCTCGAT GCCACCGTCG GGCAGAACGC GTTGAGCCAG
GTCGAGTTGT TCTCGCAGGC CGCACCCGTG TCGGGCCTCG TGATGACCAA GCTCGACGGA
ACCGCACGGG GCGGTATTCT GGTGGCGCTC GCCACGAAGT TCGGCCTGCC CGTGCACTTC
ATCGGGGTCG GCGAGGGCGT GGAAGATTTG GAGCCGTTCG CCGCGCGGGA CTTTGCCCGG
GCGATCACCG GCCTTCCCAA GGAGTAG
 
Protein sequence
MSDDEKPGWF GRLFGRKGAP ESKSPEPVPA EDAAAEETPA EETVTPDPLS PASESEGQPV 
FTTAADDVAH VPPAVSEPAP DDPDKNRIPD ELEGADLQPE PQPPSGEAPQ PDEISAESEP
APAPTETAEK RNWWSRLTGG EEETPAPAAE SEPPAEVDIQ PVDSAAALAS DAVSGAVEGS
EKQGWWSRLT AGMRRTSSAL SDRVTGLFTK RKLDATTLED LEDALIQADF GVETATRMSE
AVGKGRYEKG ISPDEVRAIL ATEIERALEP VALPIEIDSA KKPYVILTVG VNGAGKTTTI
GKLSLKFKAE GRSVMLAAGD TFRAAAIEQL RVWGDRTGTP VISRAQGSDA AGLAFDAFKE
ARENGTDVLL IDTAGRLQNK AGLMAELEKI VRVIRKLDPE APHATLLVLD ATVGQNALSQ
VELFSQAAPV SGLVMTKLDG TARGGILVAL ATKFGLPVHF IGVGEGVEDL EPFAARDFAR
AITGLPKE