Gene Mchl_2944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2944 
Symbol 
ID7115751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3106317 
End bp3107432 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content69% 
IMG OID643525694 
Productradical SAM domain-containing protein 
Protein accessionYP_002421711 
Protein GI218530895 
COG category[L] Replication, recombination and repair 
COG ID[COG1533] DNA repair photolyase 
TIGRFAM ID[TIGR00620] spore photoproduct lyase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00164371 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCTTG TTTCGACCGA GGAGGCCGAT GCCCGGCCCG TGGCGCGGCC CCGCTCCGCG 
CGTCTCTGGC ATCCGCGCCG GGTGCTGGTA ACGCCAGCCG CCCTCGAACA CGCTCACGGC
CGGCAGATGG TCGCGCAGGC GGAAGACCTC GGTCTCCCGG TCGAGCGCCT GAAGAGTAAC
CGGCTCACCG GCTTGCGCGA CGACGAGAAC CCGCGCCGGG CCTACGCGCA GGCCAAGGCC
ACGCTCGCCA TCGTCACCGC ACCGCCGACG AAGTTGAAGC TCCAACCGAT TCCGCCGAGC
GCCGACTGGC GCTTCGATCT CGCGGAAGGC TGTCCGGCGC ATTGCCAGTA CTGCTATCTC
GCCGGCTCGC TCTCGGGGCC GCCGGTGACG CGCGTCTACG CCAATCTCGA CGCGATCCTC
GGCAATCTCG AAAGCTATCT GGGGCAGGGC GGCGTCACCA GCGCCTCGGA GGCGCGGGCG
GCCGAGGGCA CCACCTTCGA GGCGTCCTGC TACACCGATC CGCTTGGGAT CGAGCATCTC
ACCGGCTCGC TCTCGGCAGC AATCCGGCAT TTCGGCGCCT GGGAGGCGCC GGTGCAACTG
CGCTTCACGA CGAAGTTCGC CGCGGTCGAA CCGCTCCTCA ACCTGCCGCA TCGCGGCCGC
ACGCGCATCC GCTTCTCGGT CAACGTGGCC GCGGCGGCGC ATTACGAGGG CGGCACCGCT
CCGCTCAGCG AGCGGCTCGC CGCCATGGGT GCCGTCGCCC GGGCCGGCTA TCCCGTCGGC
CTCACCATCG CGCCGATACT ACCCGTCGAG GGATGGCCGG ACGCCTACGA TGCCCTGCTG
CGCGACGCGG CCGAGGCGTT GTCCGGTGTG GCCGCGCCCG ATCTGACGGT GGAACTTATC
ACCCACCGCT TCACGCCGGG CTCGAAGACG GTGCTCGAAG GATGGTATCC GGGCTCCGAC
CTGCCGATGC GCGAGGCGGA GCGCACCCGC AAGCTCACCA AGTTCGGCTC GGTAAAATAC
GTGTTTCCGA ACGATCTCAT GAAGGCGATG CGGGCTCACC TCACCGGGCG GATCGCCGAA
CGCCTGCCGA CGGCGCGCAT CCTCTATTGG ACGTGA
 
Protein sequence
MTLVSTEEAD ARPVARPRSA RLWHPRRVLV TPAALEHAHG RQMVAQAEDL GLPVERLKSN 
RLTGLRDDEN PRRAYAQAKA TLAIVTAPPT KLKLQPIPPS ADWRFDLAEG CPAHCQYCYL
AGSLSGPPVT RVYANLDAIL GNLESYLGQG GVTSASEARA AEGTTFEASC YTDPLGIEHL
TGSLSAAIRH FGAWEAPVQL RFTTKFAAVE PLLNLPHRGR TRIRFSVNVA AAAHYEGGTA
PLSERLAAMG AVARAGYPVG LTIAPILPVE GWPDAYDALL RDAAEALSGV AAPDLTVELI
THRFTPGSKT VLEGWYPGSD LPMREAERTR KLTKFGSVKY VFPNDLMKAM RAHLTGRIAE
RLPTARILYW T