Gene Mchl_2940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2940 
Symbol 
ID7115747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3099811 
End bp3103077 
Gene Length3267 bp 
Protein Length1088 aa 
Translation table11 
GC content67% 
IMG OID643525690 
Producttrehalose synthase 
Protein accessionYP_002421707 
Protein GI218530891 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases
[COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis 
TIGRFAM ID[TIGR02456] trehalose synthase
[TIGR02457] trehalose synthase-fused probable maltokinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00795057 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCGATC GCAGCGATCC GCAGTGGTAC CGTGACGCCA TCATCTACCA GATCCACGTC 
AAGTCGTTCT TCGACTCGTC GAATGACGGG ATCGGCGATT TCGAGGGGCT GACGCAGAAG
CTCGATTATG TCCGCGACCT CGGGGTCACG GCGATCTGGC TGATGCCGTT CTATCCCTCG
CCGCTGCGCG ACGACGGCTA CGACATCGCC GACTACCGCG ATGTGAACCC GTCCTACGGG
ACGATGGAAG ATTTCCGCCG CTTCGTGGCT GCTGCACACG AGCGGGGGCT GCGCGTCATC
ACCGAGTTGG TCATCAACCA CACCAGCGAT CAGCACCCCT GGTTCCAGCG CGCCCGCGAG
GCGCCGGCCG GGTCGCCTGA GCGCGATTTC TACGTGTGGT CGGATACCGA CGAGAAGTAT
TCCGATACGC GCATCATCTT CCTCGACACG GAAGTGTCGA ACTGGACCTG GGACCCGGTC
GCCAAGCAGT ACTTCTGGCA CCGCTTCTAC AGCCACCAGC CCGACCTGAA CTTCGACAAC
CCGGCCGTGC TGGAGGCCGT GATCGAGGTT ATGCGCTACT GGCTCGACAT GGGCGTTGAC
GGGCTGCGGC TCGACGCGAT CCCCTACCTG ATCGAGCGCG ACGGCACGAA CTGCGAGAAC
CTTTCCGAGA CCCACGACGT CATCAAGGCG ATCCGTGCGG CGCTCGACGC CGAGTATCCC
GACCGGATGC TGCTGGCCGA GGCCAACCAG TGGCCGGAGG AAACCGCGCA GTATTTCGGC
GAGGGCGACG AATGCCACAT GGCATTCCAC TTCCCGCTGA TGCCGCGGAT GTACATGGCG
ATCGCCCGGG AGGACCGGCA CCCGATCACC GACATCATGC GCCAGACGCC CGAAATCCCC
GAGGGCTGCC AGTGGGCGAT CTTCCTGCGC AACCATGACG AACTGACGCT CGAAATGGTG
ACGGCCGAAG AGCGTGATTA CCTCTGGTCG TTCTACGCCG CCGAGCGGCG CGCCCGCATT
AATCTCGGCA TCCGCCGCCG CCTCGCGCCG CTGCTGGAGA ACGACCGCCG TAAGATCGAG
CTGATGAAGT CCCTCGTCCT GTCGATGCCC GGCACGCCGG TGCTCTACTA CGGCGACGAG
ATCGGCATGG GCGACAACAT CTATCTCGGC GACCGCGACG GTGTGCGCAC GCCGATGCAG
TGGTCGCCGG ATCGCAATGG CGGCTTCTCG CGGGCCACCC CGCAGAAGCT GTTCCTGCCC
TCGATCCAGG ACCCGATCTA CGGCTACGAC GCGATCAACG TCGAGGCGCA GATCCAGGCG
CAGACCTCGC TGCTGAACTG GACGCGGCGC ATGATCGCGA TCCGCAACAA CTCGGTCGCG
CTTGGGCGCG GCGCGATCCA GTTCCTGTAT CCGGCGAACC GCAAGGTGCT CGCCTGGATT
CGCGAGCACG AGAACGAGCG CATCCTCTGC GTCGCCAACC TCTCGCGGGC ACCGCAGGCG
GTGCAGCTCG ATTTGTCGGA TCTGCGCGGC GCGATCCCGA TCGAGCTGAC CGGCGGCACG
GCCTTCCCGG CGATCGGCGA ACTGCCCTAC CTGCTGACCC TGCCGGCCTA CGGTTTCTAC
TGGTTCGCCC TCTCGGTCGC GAATACCGGC GAGATCGGCC CGCAGCCGCA GAGCCCGGAA
CTGTTCACCC TGGTGCTCAC CGGCGGCATC GAGACCCTGA TCAAGGGCCG CGAGCGCACA
GCCTTCGAGC GCACCGTGGC GCCGCCCTTT ATCGCCTCGC GCCGCTGGTT CGGCGCCAAG
GGCACGCGCA TCAAGTCGGT GCAGGTCGAT GACAGCGCCA TCGTCAAGGA CGGCTCCGGC
GAAGGCAAGT TCCTGCTGCC GCGGGTGGCC GTGACCCTCG CCAATGGCGA GCGCCAGGAC
TACTTCGTGC CGCTCGCTGT CGAGGAGGGC CGCGAGGACG AGACTCTGCT GGGTCACGCG
GTCGCCCGCG TGCGCCGCGG GCCCCGCACC GGCCTGCTCT ACGAGGCGGC GGCCGCCGCG
CCGTTCGCCG TCGCCCTGAT CGAGGCGATG CGCGACGGCG TCACGATCCC ATCCGAGCGC
GGGAGCCTCG TCTTCTCGAC GACCTCGGCT TACGATCCGG AGGTGCCGTT CGAGGCCGCC
GACGTGCGCC GCCTCTCGGC CGAGCAGAGC AACACCTCGA TCGCCATCGG CGCGCGGATG
ATGCTCAAGC TGCTGCGCCG CCTCCAGCCC GGCACGCATC CCGAGATCGA GATCGGCCGG
TTCCTCACCG AGCAGGCCCA CTTCGCCAAC ACGCCGGCTT TGCTCGGCGT GGTGGAGCAT
GTGGCGGCGG ATGGCACCCG CACCGCCCTG GCTCTGCTCC AGAAGTTCGT CCTCAACCAG
GGCGACGCCT GGACGCTGAT GCTGGAAGGC CTGCGGCGCG ACTTCGAGAC CGTGGTGCTC
GCACCCGAGA GCGAGGCGCC GGCGCCGGAG GATGCCTTCA ATGCGCATCT GCGCTGGGCG
GAGCTGCTCG GCCAGCGGAC GGCCGAACTG CATCGGGCCT TCGCCATCGA CACCGACGAT
CCGGCCTTCG CGGTCGAGCC CTTCGATGAG GCGGATCTCG CTTCGCTTGC GGATGATGCC
CGCCATCAGG CCGCGCGTGC GTTCAAGGGG CTCGACGCGA TCACCGCTTG GTCGCCTGGC
TCGGCCAGCG AGGCGCTCGC GTCCCGCCGT AGCGAGGTCG AGGCGCTCAT CACCGATCTG
GCCTCCGGCC CGCTGCGGGG TGCCACGAAA ACCCGCATCC ACGGCGATTA CCATCTCGGT
CAGGTGCTCG CCTCCGAGGG CGATCTCATC ATCGTCGATT TCGAGGGCGA GCCCTCGCGT
CCGGTGGAGC AGCGCCGGGC CAAATCGACG CCGATGCGCG ACGTGGCGGG CATGCTCCGC
TCCTTCGCCT ACGGCGCCGA AACGGTGGTG CGTGAGATCA CGGCTCGCTT CGGCGACAGC
GAGGAACGGG CGCGCAACGC GGCGATCGCG TGGCGCGGCA TGATCGATGC AGCGTTCCTC
GACGGCTACG GGCAAGCCGT GGCCGGCAGC CGGGCGGCGG TGGAGGATGC GGAGACGCAA
TCCCGTCTGC TGCGTCTGAG CCTGCTGACC AAGGCGCTCT ACGAGGTCGA TTACGAAGTG
AACAACCGCC CCGACTGGAT CGAAATCCCA GCACGTGGTG TTCTCAACAT ACTGGATGAA
GCCAAGCGCG ACCGCGCTTC GGTGTGA
 
Protein sequence
MIDRSDPQWY RDAIIYQIHV KSFFDSSNDG IGDFEGLTQK LDYVRDLGVT AIWLMPFYPS 
PLRDDGYDIA DYRDVNPSYG TMEDFRRFVA AAHERGLRVI TELVINHTSD QHPWFQRARE
APAGSPERDF YVWSDTDEKY SDTRIIFLDT EVSNWTWDPV AKQYFWHRFY SHQPDLNFDN
PAVLEAVIEV MRYWLDMGVD GLRLDAIPYL IERDGTNCEN LSETHDVIKA IRAALDAEYP
DRMLLAEANQ WPEETAQYFG EGDECHMAFH FPLMPRMYMA IAREDRHPIT DIMRQTPEIP
EGCQWAIFLR NHDELTLEMV TAEERDYLWS FYAAERRARI NLGIRRRLAP LLENDRRKIE
LMKSLVLSMP GTPVLYYGDE IGMGDNIYLG DRDGVRTPMQ WSPDRNGGFS RATPQKLFLP
SIQDPIYGYD AINVEAQIQA QTSLLNWTRR MIAIRNNSVA LGRGAIQFLY PANRKVLAWI
REHENERILC VANLSRAPQA VQLDLSDLRG AIPIELTGGT AFPAIGELPY LLTLPAYGFY
WFALSVANTG EIGPQPQSPE LFTLVLTGGI ETLIKGRERT AFERTVAPPF IASRRWFGAK
GTRIKSVQVD DSAIVKDGSG EGKFLLPRVA VTLANGERQD YFVPLAVEEG REDETLLGHA
VARVRRGPRT GLLYEAAAAA PFAVALIEAM RDGVTIPSER GSLVFSTTSA YDPEVPFEAA
DVRRLSAEQS NTSIAIGARM MLKLLRRLQP GTHPEIEIGR FLTEQAHFAN TPALLGVVEH
VAADGTRTAL ALLQKFVLNQ GDAWTLMLEG LRRDFETVVL APESEAPAPE DAFNAHLRWA
ELLGQRTAEL HRAFAIDTDD PAFAVEPFDE ADLASLADDA RHQAARAFKG LDAITAWSPG
SASEALASRR SEVEALITDL ASGPLRGATK TRIHGDYHLG QVLASEGDLI IVDFEGEPSR
PVEQRRAKST PMRDVAGMLR SFAYGAETVV REITARFGDS EERARNAAIA WRGMIDAAFL
DGYGQAVAGS RAAVEDAETQ SRLLRLSLLT KALYEVDYEV NNRPDWIEIP ARGVLNILDE
AKRDRASV