Gene Mchl_2911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2911 
Symbol 
ID7115718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3060823 
End bp3061716 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content67% 
IMG OID643525661 
ProductXylose isomerase domain protein TIM barrel 
Protein accessionYP_002421678 
Protein GI218530862 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.180268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.124085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC GCTTTGCCTA CAACACCAAC GGCACCGCCA ATCACCGCAT CGAGGATGCG 
ATCCGCCTCA TCAAGGATGC GGGCTACGAT GGCGTCGCGC TCACCCTCGA CATCCACCAT
CTCGACCCCT TCGCCGAGAA TTGGGTGAAC GAGGCCGATC GCATCGCCAG TCTCCTGAAC
CGGCTCGAAC TCGGTTCGGT GATCGAGACC GGCGCCCGCT TCCTGCTCGA CCCGACCGCC
AAGCACGAGC CGACGCTCGT CACTGCCGAC GCTTCAGGCC GTGCGCGGCG CGTTGGCTTC
CTCAAGCGGG CGATCGAGAT CGGAAAGATC CTGAATTCCG AGGCCGTCTC GTTCTGGGCC
GGCGTACCGA AGCCGGGCGT CGACCACGGC GAGGCGCGGG GTTGGCTGAT CGAGGGTCTG
CGTGAAGTCG CCGACTTCGC CGCCGAGAAG GGCGTCGTCG CAGCCCTCGA ACCCGAACCC
GGCATGCTGA TCGAGACGCT CGACGACTTT GCCGCGATCG ACCTGCCGGG TCTGTCGCTC
GCCCTCGATA CCGGTCACTG CCTCGTCACG GGAGAGCGCG ATCCGGCCGC GGCCGTGCAC
GAATTCGCCC CGCGCCTCGG CACCGTGGCG ATCGAGGACA TGAAGCGGGG CGAGCACGTC
CATCTGCCCT TCGGCGAGGG CGACATGGAT GTCCCGGCCG TTCTCGACGC GCTCGACGCG
ATCGGGTTCG GGAAACTCGT CTGCGTGGAA CTCTCGCGCG AGTCGCACCG CGCCGACGTG
ATGGTCATCC AATCCCTCGA TTATCTCCGC ACCTGCCGCC GTCCCGGCCC CGGTCTTCCG
ATGCCGGACA CCACACCGCG CGAAGCCGCG ATGCCCGGGC TGCCCACGTC ATGA
 
Protein sequence
MSLRFAYNTN GTANHRIEDA IRLIKDAGYD GVALTLDIHH LDPFAENWVN EADRIASLLN 
RLELGSVIET GARFLLDPTA KHEPTLVTAD ASGRARRVGF LKRAIEIGKI LNSEAVSFWA
GVPKPGVDHG EARGWLIEGL REVADFAAEK GVVAALEPEP GMLIETLDDF AAIDLPGLSL
ALDTGHCLVT GERDPAAAVH EFAPRLGTVA IEDMKRGEHV HLPFGEGDMD VPAVLDALDA
IGFGKLVCVE LSRESHRADV MVIQSLDYLR TCRRPGPGLP MPDTTPREAA MPGLPTS