Gene Mchl_2904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2904 
Symbol 
ID7115711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3052223 
End bp3053203 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content71% 
IMG OID643525654 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_002421671 
Protein GI218530855 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.099364 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGTC TGACCGTTGC CGTCGAGCGC TTCCCCATTG CCGGATCGTT CACGATCTCC 
CGCGGCAGCC GCACCGAGGC GGTCGTCGTC GTCGCGACCG TGGAGGACGG TTCGTTTCGC
GGCCGGGGCG AGTGCGTGCC CTATGCCCGC TATGGCGAGA CGGTCGAGAA TGTCGCCGCC
TTCCTCGACG AGCAGGCGGC CTGGATCGCC GACGGGGGAG GGCGGTTCGA CCTCGCTGAA
CGGATGAAGC CGGGTGCGGC CCGCAACGCC CTCGACTGTG CGCTGTGGGA CCTCGAAGCG
AAGCGCAGCG GTAAGCCCGC TTACGAGCTT GCGGGGGTTG CCGCACCGGG GCCGGTCACC
ACCGCCTACA CGCTGAGCCT CGGTGATCCG GATGCGATGG AGGAAGCGGC CCGTGGGGCG
GCGCACCGGC CGCTGCTGAA GGTGAAGCTC GGCGGCGAGG GCGACCCCGA GCGGATTGCC
GCCGTGCGCC GCGGCGCGCC GGATTCGCGC CTCATCGTCG ATGCCAACGA GGCGTGGCGG
CCCGAGACGA TACGCGACAA CCTCGCGGCC TGCGCGGCGG CGGGTGTCAG CCTGATCGAG
CAGCCGCTGC CGGCGGGCGA GGACGGCTTG CTCGCCGAGA TCGACCGCAC GATACCGATC
TGCGCCGACG AGAGCCTGCA CGACCGCGCC GGGCTCGATG CCCTGGCCAA GCGCTACGAT
GCGATCAACA TCAAGCTCGA CAAGGCGGGC GGCCTCACGG AAGCGCTGAA GCTCGCCCAC
GAGGCGCGGG CGCGCGGCTT CGAGATCATG GTCGGCTGCA TGGTCGGCTC GTCGCTCGCC
ATGGCACCGG CCCTGCTGCT CGCCCATCAT GCGGCTTACG TCGATCTCGA CGGGCCGCTG
CTGCTCGCCC AGGATCGGGC GCCGGCCCTG CGCTACGAGG GCAGCACGGT CTATCCGCCG
CAGCCCGAGC TGTGGGGTTG A
 
Protein sequence
MPRLTVAVER FPIAGSFTIS RGSRTEAVVV VATVEDGSFR GRGECVPYAR YGETVENVAA 
FLDEQAAWIA DGGGRFDLAE RMKPGAARNA LDCALWDLEA KRSGKPAYEL AGVAAPGPVT
TAYTLSLGDP DAMEEAARGA AHRPLLKVKL GGEGDPERIA AVRRGAPDSR LIVDANEAWR
PETIRDNLAA CAAAGVSLIE QPLPAGEDGL LAEIDRTIPI CADESLHDRA GLDALAKRYD
AINIKLDKAG GLTEALKLAH EARARGFEIM VGCMVGSSLA MAPALLLAHH AAYVDLDGPL
LLAQDRAPAL RYEGSTVYPP QPELWG