| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_2883 |
|---|
| Symbol | |
|---|
| ID | 7115690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 3031229 |
|---|
| End bp | 3032764 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643525633 |
|---|
| Product | protease Do |
|---|
| Protein accession | YP_002421650 |
|---|
| Protein GI | 218530834 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACTCG CCGCGAACGC CGTCCGGGGT CGAACGCCGT CGTTCGCCCG GCGCGCCTCA
TCGGCCCTGG CCGCTGCGGT GCTGGGCGTC ACCGTCACGG TCACCGCCCT GCCGCTCCCC
GCCTTCGCCC GTGGCCCGGA ATCGCTCGCC GACCTTGCCG ACAAGGTGAC GGATGCGGTG
GTGAACATCT CGGCCTCGAC GACGGTCGAA GCCAGCAACC GCGGCGGCCG GACCATGCCG
CAACTGCCGC AGGGCACACC GTTCGAGGAT CTCTTCGAGG AGTTCTTCAA GCGGCGCGGC
CAGGGCGCGC CGAAGGGTGA CGACGAAAGC CCGCGCGGAC CGACGCGCAA GTCGAACTCG
CTCGGCTCCG GCTTCATCAT CGACGCCTCG GGCATCGTGG TGACGAACAA CCACGTCATC
GGCGACGCCA ACGACATTCA GGTCATCCTG AGCGACGGCA CCAAGCTGAA GGCGGAGATC
ATCGGCAAGG ATTCGAAGAT CGACCTCGCC CTGCTTCGGG TGAAGCCGAC CGCCGAGCGC
CCGCTTAAGG CCGTGCCCTT CGGCGATTCC GACAAGATGC GCCCGGGCGA CTGGGTGATG
GCGATCGGCA ACCCGTTCGG CCTCGGCGGC TCGGTCTCCG CCGGCATCGT CTCGGCGCGG
GGCCGCAACA TCGAGTCCGG TCCCTACGAC AACTACATCC AGACGGATGC GGCCATCAAC
AAGGGCAATT CCGGCGGCCC GCTGTTCAAC ATGGACGGCG AGGTGATCGG CATCAACACC
GCCATCCTTT CGCCCTCCGG CGGTTCGGTG GGCATCGGCT TCGCGGTGCC GTCGGCAACC
GCCGGTCAGG TCGTCGATCA GCTCCGCCAG TTCGGCGAGG TCCGCCGCGG CTGGATCGGC
GTGCGCATCC AGAACGTCGA TGAGGCCACC GCCGAGGCGC TCGGTCTGAA GGGCGGCGCC
AAGGGTGCGC TAGTGGCCGG CGTCGATGAG AAGGGCCCGG CCAAGACCGC GGGGCTCGAG
GTCGGCGACG TCATCGTCAA GTTCAACGGT GTGCCGGTGA AATCCTCCAG CGAGCTGCCG
CGGATCGTCG CCGCGACCCC CGTGGGCAAG TCCGTGGACG TTCAGGTCGT GCGCAAGGGC
GAGGAGCAGA CGAAATCCGT CGTGCTCGGT CGCCTCGAGG ACGGCGAGAA GGCTCAGGTC
GCCAACCTCA AGCAGCCGGA GGCGGACTCG GTCAATCGCC AGGTCCTCGG CCTCAACCTC
TCCGGCCTCA ACGACGAGGT GCGGCGCCGG TATGGCATCA AGGAGAGCGT CAAGACCGGC
GTGGTCGTGA CCAAGGTCGA TCCCAACTCG ACCGCGGCCG ACAAGCGCAT CCAGCCGGGC
GAGGTCATCG TCGAGGTCGG CCAAGAGGCG ATCTCGAACC CGGCCGACGT GACGAAGCGC
GTCGAGGCGC TCAAGAAGGA GGGCCGCAAG TCGGTCCTGT TGCTGGTGGC CAGCACCAGC
GGCGACGTGC GCTTCGTGGC GATCGGGTTG GAGTAA
|
|---|
| Protein sequence | MRLAANAVRG RTPSFARRAS SALAAAVLGV TVTVTALPLP AFARGPESLA DLADKVTDAV
VNISASTTVE ASNRGGRTMP QLPQGTPFED LFEEFFKRRG QGAPKGDDES PRGPTRKSNS
LGSGFIIDAS GIVVTNNHVI GDANDIQVIL SDGTKLKAEI IGKDSKIDLA LLRVKPTAER
PLKAVPFGDS DKMRPGDWVM AIGNPFGLGG SVSAGIVSAR GRNIESGPYD NYIQTDAAIN
KGNSGGPLFN MDGEVIGINT AILSPSGGSV GIGFAVPSAT AGQVVDQLRQ FGEVRRGWIG
VRIQNVDEAT AEALGLKGGA KGALVAGVDE KGPAKTAGLE VGDVIVKFNG VPVKSSSELP
RIVAATPVGK SVDVQVVRKG EEQTKSVVLG RLEDGEKAQV ANLKQPEADS VNRQVLGLNL
SGLNDEVRRR YGIKESVKTG VVVTKVDPNS TAADKRIQPG EVIVEVGQEA ISNPADVTKR
VEALKKEGRK SVLLLVASTS GDVRFVAIGL E
|
|---|
| |