Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_2801 |
Symbol | |
ID | 7115030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 2954936 |
End bp | 2955643 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643525549 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002421568 |
Protein GI | 218530752 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0678244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGACG AACTGATTCG CAGTGAATTG CCGGATGATC CCGGCTCCGT ACGGGTCGAA GCGGTAAAAG CCGTTCCGCG CCAGTTGGCG CTTGCCTTGC GGGACTACTT TGACCTGGCG GAGCAGGCTC CGTTGCCGAG CCCGCTCGCG GCACTGTTGC GACAGTTCGA GACGGCGCTC GCCGCCCATG GCGGAGCGGT CGAAACCATT TTCCGCGACG ATCTGGTGAA GGCGCTGCCG ATGCTGCGCA CCTTCGCGAT CTCGCTCACT GCCAACCCGA CCCGTGCCGA CGATCTCGTT CAGGAGACGA TGGTGAAGGC GTGGGCTAAC CGGGAGCGGT TCACGCCGGG CACGAACTTC ACGGCGTGGC TGTTCACCAT CCTGCGCAAC CAGTTCTACA CCGAGATCCG CAAGGGGCGC CGCGAAGTCG AGGATGCCGA CGGCGTCCAC GCCGGGACGC TGACCGCTCA CCCCGATCAG GAGCACGCGG CGGGCCTGCG GATGGTGATG AACTTGATCG GCACCCTGCC GCTGCCGCAA CGGCAGGCGC TTCTGCTGGT CGGTGCCGAG GGCTTCACCT ACGAGGAAGC GGCCGAGCAG CTCGGCTGCC AGGTCGGCAC GGTCAAGAGC CGCGTCAGCC GCGCGCGGGC CTTTCTCGTC GATTCCTTCG AGGGTCTGCC GAACGGATTG TCGGCGGCAC GGGCCTGA
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Protein sequence | MPDELIRSEL PDDPGSVRVE AVKAVPRQLA LALRDYFDLA EQAPLPSPLA ALLRQFETAL AAHGGAVETI FRDDLVKALP MLRTFAISLT ANPTRADDLV QETMVKAWAN RERFTPGTNF TAWLFTILRN QFYTEIRKGR REVEDADGVH AGTLTAHPDQ EHAAGLRMVM NLIGTLPLPQ RQALLLVGAE GFTYEEAAEQ LGCQVGTVKS RVSRARAFLV DSFEGLPNGL SAARA
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