| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_2760 |
|---|
| Symbol | |
|---|
| ID | 7113950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 2907775 |
|---|
| End bp | 2909724 |
|---|
| Gene Length | 1950 bp |
|---|
| Protein Length | 649 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643525508 |
|---|
| Product | Capsule polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_002421527 |
|---|
| Protein GI | 218530711 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3563] Capsule polysaccharide export protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0643593 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC TGCGCCCCAT CGAGCCGCAA GGCGATACCG GGCTGCCCCG CACCTACCTG
CCGCTCGGCC GGATGGTCCG GCTTCTGCGC GCGCAGATCG AGGCGGCAAC GGGTGCATCG
TTGACCTTCC GCTCCCCCGG CCCGCCAGCC TTGTGGTCGG CGACGGCAGC CGACGGCAAG
GCGGTTCTGC GGGTCGCGCC GGGCCCGCTC CTCAGCCCCT ACGATTCGCC GGAAACCGGC
CTTTCGAGCC TTCGCCTCAG CTATGCCGGC CGGCCCCTCG GAGGTGAGCC CCCCTCCCCG
GATTTCGGCG ACCTTCTGCG CGCGCGCGGC CTCGCCGGCT ACAACCGCTT CGCCCGATCG
CTTCCGGATG GAGCGGCCGA ACTCTTCTCA GGACAGGCGC GGCCTGCCCT TGCCCTGAGC
GATCCGCAAA CCGCCGCCTC CGGCGCTGCC CTGCGAAGCT TCCTGACGCG GCTTCTCGCC
GAGAATCCGG GGACGCACTT CGTTGCCGCC GGCCCCGACG GATGCCCGCG TGATGGCGCG
CCCACCGATC CGCGGCTCAC CCTGATCGCG GGCCCGGCCG ATCCGTGGCT GCTGTTTCCC
CTCGCGGCGC GCATCTACGT GGCGCGGTGG GATGCGGCCT GCGAGGCGGC GCTGGCCGGC
TTCGAGACCC ATTGTCCCGA CCCTGCGGCG GGTCCGCGCC CGGCGGATGC GGCGGCGTTC
CTGGCGCTCC GTTACGGCAT CGGCGTGCAC GGCTTCGATC CGTGGACGCG CCGGCCGATC
CCGCTCGCGG ATGCGGCGGA GCGCGTGGCT TGGCTGCGCG ACCGCTTCCT CGGCAACGAC
CGCCGCGTCG TCCTCGTCGG CGTGTCCGGC TGGAAGCGCG CCGCGCTCGA TGTCTTCGCC
ACCGGGCCGG CGGGACCGCC GCTCCACACC ATGATTGCGG ACGAGGCGGT GGCGCTCGCT
CGCGCGCAGG GCGGCCGGGT TCAGGCCTGG GCGACCCGCT GCCCGGAGCA GCTCCCGCGT
CTCTGCGCGG AGGCCGGCTT GCCCTTCGCG CGGATCGAGG ACGGATTTCT GCGCTCGGTC
GGGCTCGGCG CCAGCCTGGA GCCGGGCGCC TCCATCGTCG TCGACGATCT CGGCATCTAC
TACGACCCGC GGGTGGAGAG CCGCCTGGCC CGCACGCTGA AAGAAGCCGA GTTCCCGCCC
GGACTGACCG CCCGCGCCGC CGCCTTGCGC GAATCGATCG TGGCGCGGCG CCTGAGCAAG
TACAATGTCG GCCTCGAAGG CGTCGGCGAG GACTGGCCCG CGGACCGGCG GATCGTGCTG
GTGCCGGGCC AGGTCGAAGA CGACGCCTCG GTGCTGACCG GTTCGCCGCA GGTGCGCGGC
AACCTCGCCC TGCTGCGGGC TGCTCGCGCC CGCAACCCGG ACGCCTTCCT GCTCTACAAG
CCGCATCCCG ACGTCGAGGC CGGGTTCCGG CCCGGCGCGA TCCCGGAGGA GGAGGTGCGG
CGGCTCGCCG ACCGTGTCGT CGGCGGCCTC TCCATCGTCG ACCTTCTCGA TCGTTGCCAC
CATGTCGAGA CCATGACCTC GCTGGCGGGC TTCGAGGCGC TGATCCGCGG GTTGAGCGTC
GCCGTCCACG GCCGCCCCTT CTATGCCGGC TGGGGGCTGA CCGAGGATCT GGCACCGGGG
GCCGACCGCG GCCGCACATT GTCCCTCGAC GCCCTGGTGG CGGGTGCGCT GATCCTCTAC
CCGCTCTATC TCGATCCGGT GGCGATGAAG CCGTGCACGC CCGAGCAACT GCTCGACCGG
CTCAGCGAGG CTCGGGCGGC CGCGCCGCCT TCGCGTCTCG CCCTCAGCGC CGTCCGTCAC
GCGACGATGC GGCTGCGCTA CGCCCTGATC AATCCCGTCA TCCGCCGCCT GCGCGCCCGC
CGCGGCGTGC GCAGTGAATC CGGCCGCTGA
|
|---|
| Protein sequence | MTDLRPIEPQ GDTGLPRTYL PLGRMVRLLR AQIEAATGAS LTFRSPGPPA LWSATAADGK
AVLRVAPGPL LSPYDSPETG LSSLRLSYAG RPLGGEPPSP DFGDLLRARG LAGYNRFARS
LPDGAAELFS GQARPALALS DPQTAASGAA LRSFLTRLLA ENPGTHFVAA GPDGCPRDGA
PTDPRLTLIA GPADPWLLFP LAARIYVARW DAACEAALAG FETHCPDPAA GPRPADAAAF
LALRYGIGVH GFDPWTRRPI PLADAAERVA WLRDRFLGND RRVVLVGVSG WKRAALDVFA
TGPAGPPLHT MIADEAVALA RAQGGRVQAW ATRCPEQLPR LCAEAGLPFA RIEDGFLRSV
GLGASLEPGA SIVVDDLGIY YDPRVESRLA RTLKEAEFPP GLTARAAALR ESIVARRLSK
YNVGLEGVGE DWPADRRIVL VPGQVEDDAS VLTGSPQVRG NLALLRAARA RNPDAFLLYK
PHPDVEAGFR PGAIPEEEVR RLADRVVGGL SIVDLLDRCH HVETMTSLAG FEALIRGLSV
AVHGRPFYAG WGLTEDLAPG ADRGRTLSLD ALVAGALILY PLYLDPVAMK PCTPEQLLDR
LSEARAAAPP SRLALSAVRH ATMRLRYALI NPVIRRLRAR RGVRSESGR
|
|---|
| |