| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_2757 |
|---|
| Symbol | |
|---|
| ID | 7113947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 2903486 |
|---|
| End bp | 2904610 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643525505 |
|---|
| Product | Extracellular ligand-binding receptor |
|---|
| Protein accession | YP_002421524 |
|---|
| Protein GI | 218530708 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.364388 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTCC GACGCCCCCT CGCCCTCGGT TCGGCCTCGC TCGCCCTGCT GGCCGGGCTC
CTACTGTCGG CTGTTCCGGC CATGGCGGAG GTCAAGGTCG GCGTCGCGGT GCCGCGCACC
GGCCCCTACG TCACCGTCGG CGCGCAGGTG CTGCGCGGCG TTGAGGCGGC GGCGCGGGAC
GCCAACGCGA AGGGCGGCAT CAACGGCGAG CCCATCGTGC TCGACGTGCA GGACGATTCC
TGCGATTCGA ATCAGGCCGT GGCGGTGGCC AACCACTACG TGAACACGGG CGTGCGGCTC
GTCGTCGGCC ACGTCTGCTC GAATGCGTCG CTCGCGGCCT CCGATGTCTA CGCCGCCAAC
GGAATCGTGA TGATCACCGC GGCCTCGGTC GCCGCCAAGC TGACCGACCG CGGTTTGCCG
ACGATCTTCC GGGTCTGCGG CCGGGACGAC GACCAGGCCA AGCTCTCCGC CGCGATCCTC
GCCGAGCGGT TCCGCGACCG GCGGATCGCC ATCCTCAACG ACCTCTCGCC GGCCTCGCGC
ACCCTCGCGG CGGCGACCAA GGACAACCTC AACCGTATCG GCGTCAACGA AGCGATGGCG
GCGGCCTTCC AGCCGAGCGA TGCCGACGAC GTGGCCCTCG CCGACCGGTT GAAGGCGGCG
AATATCGACG TGGTCTATTA CGGCGGCGAC GCGCAGGAGA TGGGCCGGCT GGTCCGCATC
GCGGCCGAAC GGGGCTTTCG CCCGCAATGG TTCGGCACCT CGGCCATCGC CACGCCAGAT
TTTGCCAAGA TCGCCGGCCC CGCCAGCAAC GGCGTGCTGA TGACCTTCTA TCTCGATCCG
AGCCGGAAGC CGGAGGCGCA GGGCGTGGTG GCCGAGTTCA AGGCGCAGGG CGTCGAGGCG
GACGGCTCGA TGATCTACGG CTATGCCGCG CTCCAGGCGC TGGTGGAGGC CGGCAACTTC
GCCCACAGCA CGGAGCCCGC GGCGATCGCC AAGGCCCTGC ACGGCGAGCG CTTTGATCTG
GTGCTCGGCC CCGTCGGCTT CGACGCCAAG GGCGACATCA CCGCCCAGGG CTACGTGCTC
TACGTCTGGC GCGACGGCAA CTTCACGCCG GCCAAATCGA ACTGA
|
|---|
| Protein sequence | MTVRRPLALG SASLALLAGL LLSAVPAMAE VKVGVAVPRT GPYVTVGAQV LRGVEAAARD
ANAKGGINGE PIVLDVQDDS CDSNQAVAVA NHYVNTGVRL VVGHVCSNAS LAASDVYAAN
GIVMITAASV AAKLTDRGLP TIFRVCGRDD DQAKLSAAIL AERFRDRRIA ILNDLSPASR
TLAAATKDNL NRIGVNEAMA AAFQPSDADD VALADRLKAA NIDVVYYGGD AQEMGRLVRI
AAERGFRPQW FGTSAIATPD FAKIAGPASN GVLMTFYLDP SRKPEAQGVV AEFKAQGVEA
DGSMIYGYAA LQALVEAGNF AHSTEPAAIA KALHGERFDL VLGPVGFDAK GDITAQGYVL
YVWRDGNFTP AKSN
|
|---|
| |