Gene Mchl_2724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2724 
Symbol 
ID7113914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2863372 
End bp2864907 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content68% 
IMG OID643525472 
ProductRNA polymerase, sigma 54 subunit, RpoN 
Protein accessionYP_002421491 
Protein GI218530675 
COG category[K] Transcription 
COG ID[COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog 
TIGRFAM ID[TIGR02395] RNA polymerase sigma-54 factor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.174199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTGC TCCAGCGGCT CGAGATGCGC CAGGGTCAAG CCCTGGTGAT GACACCGCAA 
CTGCTGCAGG CGATCAAGCT CCTGCAGCTC TCGCAGCTCG ATCTCTCGGC CTATGTCGAT
GCCGAACTGG AGCGCAATCC GCTTCTGGAG CGCGCCGAGT CCGAAGGGGA ATCCGAGCGC
GAGGCGCCGG AGGCCTCGGG CGATGGCGAG TACGACGGCG GCGACGGGCC GGAAGCCGAG
ACATGGCTCG GCTCCGAGAT GACGCAGAGC CGCAGCGAGA TCGAGGGCGA CCTCGACACG
CGCCTCGACA ACGTGTTCGC CGACGAGAAC CCTACCCCGC GCGAGACCGG GACCGGGGAC
ATGCTCTCGC TGACCCCAGC CCCTTACGGC AATGCCGGCG GCAGCTTCGA CGGCGAGCTT
CCCGATTTCG AAGCGACGCT GACCGCCGAG ACCAGCTTGC GCGAGCATCT CGCCGGACAG
CTCAATCTCG CGACGCAAAA CCCCTCAGAC CGGTTGATCG GCAGCTTCCT GATCGATGCG
GTCGACGATG CGGGTTACCT GCGCGAGGAC ATCGACGGCG TGGCCGAGCG GCTCGGCGCC
TCCCTCGATG ACGTCGCCCG CATTCTGAAA CTCGTCCAGA CCTTCGATCC GCCGGGCGTG
GCCGCCCGCG ACCTCGCCGA ATGCCTCGCG ATCCAGCTTC GCGAGCAGGA TCGGTTCGAT
CCGGCGATGC AGGCGCTGGT CTCGCGCCTC GATCTCGTGG CCAAGCGCGA CTTCCCAGCC
CTGCGCCGCC TCTGCGGCGT GGACGACGAG GATCTCGTCG AGATGCTGGC CGAGATCCGG
CGCCTCGACC CGAAGCCCGG CCGCGCCTTC GGCGCCCACG CAGTCGAGGT TTTGGTCCCC
GACGTGTTCG TCCGCCCCGC GCCCGACGGC TCCTGGCTGG TGGAACTGAA CTCCGAGGCG
CTGCCGCGGG TGCTGGTCAA CCAGAGCTAC TATGCCCGCG TCTCGAAGGG CGCAGTGGCG
GACGGCGACA AGGCGTTCCT GTCCGAGTGC CTGCAGACGG CGAACTGGCT CACCCGCAGC
CTGGAGCAGC GGGCGCGCAC CATCCTGAAG GTCGCGACCG AGATCGTCCG CCAGCAGGAC
GCCTTCTTCC TGCACGGTGT CGCCCATCTG CGTCCGCTCA ACCTCAAGAC GGTCGCCGAG
GCGATCGGCA TGCACGAATC GACCGTCTCC CGCGTCACCT CCAATAAGTC GATCGGCACC
AGCCGCGGCA CCCTGGAGAT GAAGTACTTC TTCACCGCCG CAATCCCCGG CGCCGCCGGT
GCCGCGTCCC ATTCCTCGGA ATCGGTGCGC CACCGCATCA AACAACTTGT CGATGCGGAG
GCCTCCGACG TCCTGTCCGA CGACGCGCTG GTCCAGCGCC TGCGCGACGA GGGCATCGAC
ATCGCCCGCC GCACCGTCGC CAAGTATCGG GAGTCGCTGC GGATCCCCTC GTCGATCGAG
CGCCGCCGGG AGAAGATGGC CACGGCCGTC CGCTGA
 
Protein sequence
MSLLQRLEMR QGQALVMTPQ LLQAIKLLQL SQLDLSAYVD AELERNPLLE RAESEGESER 
EAPEASGDGE YDGGDGPEAE TWLGSEMTQS RSEIEGDLDT RLDNVFADEN PTPRETGTGD
MLSLTPAPYG NAGGSFDGEL PDFEATLTAE TSLREHLAGQ LNLATQNPSD RLIGSFLIDA
VDDAGYLRED IDGVAERLGA SLDDVARILK LVQTFDPPGV AARDLAECLA IQLREQDRFD
PAMQALVSRL DLVAKRDFPA LRRLCGVDDE DLVEMLAEIR RLDPKPGRAF GAHAVEVLVP
DVFVRPAPDG SWLVELNSEA LPRVLVNQSY YARVSKGAVA DGDKAFLSEC LQTANWLTRS
LEQRARTILK VATEIVRQQD AFFLHGVAHL RPLNLKTVAE AIGMHESTVS RVTSNKSIGT
SRGTLEMKYF FTAAIPGAAG AASHSSESVR HRIKQLVDAE ASDVLSDDAL VQRLRDEGID
IARRTVAKYR ESLRIPSSIE RRREKMATAV R