| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_2715 |
|---|
| Symbol | |
|---|
| ID | 7113905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 2855259 |
|---|
| End bp | 2856785 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643525463 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_002421482 |
|---|
| Protein GI | 218530666 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.271597 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.533444 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATCT CCGAAGGCGA ACAGAACCGG ATGGAGAGAC GCCCGCTTTC GGCGTGGTGG
CTTCCGCTGT CCCGGCACGT CCGCTCCGCC CGGAGCTGGA TCATCCTCGG CGTGCTCGCG
CCGATCGGCA TGCTGGTGCT CTCGGCCATC ATGCTGCTCG AGCTTCGCCA GGATGCTTGG
GACAAGGCCG AACAGACCTC GAAGAACCTG CTTCAGGTGA TCGAGCGCGA CATCGCCCGC
AATGTCGAGA TCATCGATCT GTCCCTCCAG GGCGTTGTCG ATAACCTCAA GGTGCCCGGC
TTAGCCGGTG CCAGTCCGTC CTTGCGCCGC ATCGCTCTGT TCGATCGCGC CGCGACCGCC
TGCGACATGG GGGTCATGCT GGTGATCGAC GAGAACGGCG ACAGCATCAT CGATGCGAAC
GCCGACATGC CCCGCCGGCT CAACAATGCC GACCGCGATT ACTTCCAGGC CCACAAGACG
CAGGCCGGTC TCGGCTTGCA CATCAGCAGG CCCTTGATCT CGCGTCTGCT CGGCGAACCG
GTGATTGTGC TGAGCCGGCG CATCGACAAG CCGGACGGCA GCTTCGGCGG CGTGGTGCTG
GCGAGCCTGA AACTGTCCTA TTTCAGCAGC CTGTTCGCCC GGATCGGGCT TGGTCGCGAA
GGCGGGATCA ACCTTTACCT GCGCGACGGC ACCCGCGTGA TGCGCTACCC CTTCGTGGCG
AGCGATATCG GTGCCAACAT CACCGGTGCC CCCACCTTCC AGAATTTCGT CGCCAAGCGC
GAAGGCAGCT TCAAGGGGAT CTCCGTCCGC GACGGCGTCG AGCGGTATTA CACCTTCACC
CAGGTCGGGG ATTGGCCGCT CGTCCTCAAC GTCGCCCTCG GAACGCGGGA GATCGAGGCG
GAATGGCGGG AGACGGCCGC GGTCATCGGC TTGGCGGTCC TCGTCCTGTG CGGATCGACC
GTTCTGCTCT CGCTGCTCTT TGGGCGGGAA CTGCGCCGCA GCGCGGCCAT GCAGGCCGAA
CTGGCGCGCC TCGCCCAGAC CGACGTTCTG ACCGGCCTGC CGAACCGGCG GCATTTTGAA
ACAGTCTTCG CCCAGGCCTG GGGGACGTCC CGGCGCACGG GCGCACCGCT CGCGCTCATC
CTGATCGATG CCGACCACTT CAAGCGCTAC AACGATCGCT ACGGCCACGC GGTCGGCGAC
GCCGTGCTCA GGGGGCTCGC GGACAGCTTG AGCGCCAGCG TTCGCCGGCC GGGCGACCTC
GTCGCTCGCG TCGGCGGAGA GGAGTTCGCC GTCCTGCTGC CCGCGACGGA CCGCGATGGC
GCGATGCGCG TCTCCGAGAC GATTCACCGG GCGATCACAG GATTCGCCAT GCCCTCGGTC
GGCATCGGTC CCGGAACAGT CACCGTGAGC CTCGGCCTCG CCGTGGATTC CGGCGGCGGC
ACCGCCGAGG ATCTCTACCG GCGGGCCGAC GCGGCGCTCT ACGAGGCCAA GGCGGGCGGG
CGGAATCAGA CCCGATCGGC GGCCTGA
|
|---|
| Protein sequence | MRISEGEQNR MERRPLSAWW LPLSRHVRSA RSWIILGVLA PIGMLVLSAI MLLELRQDAW
DKAEQTSKNL LQVIERDIAR NVEIIDLSLQ GVVDNLKVPG LAGASPSLRR IALFDRAATA
CDMGVMLVID ENGDSIIDAN ADMPRRLNNA DRDYFQAHKT QAGLGLHISR PLISRLLGEP
VIVLSRRIDK PDGSFGGVVL ASLKLSYFSS LFARIGLGRE GGINLYLRDG TRVMRYPFVA
SDIGANITGA PTFQNFVAKR EGSFKGISVR DGVERYYTFT QVGDWPLVLN VALGTREIEA
EWRETAAVIG LAVLVLCGST VLLSLLFGRE LRRSAAMQAE LARLAQTDVL TGLPNRRHFE
TVFAQAWGTS RRTGAPLALI LIDADHFKRY NDRYGHAVGD AVLRGLADSL SASVRRPGDL
VARVGGEEFA VLLPATDRDG AMRVSETIHR AITGFAMPSV GIGPGTVTVS LGLAVDSGGG
TAEDLYRRAD AALYEAKAGG RNQTRSAA
|
|---|
| |