| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_2657 |
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| Symbol | |
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| ID | 7117407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | + |
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| Start bp | 2791950 |
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| End bp | 2794316 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643525403 |
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| Product | ribonuclease R |
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| Protein accession | YP_002421425 |
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| Protein GI | 218530609 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCAGAC GCATCAATCC GACGGCGGGC ACCCCCGTTC TCCCCTCCCG CGAGCAGATC
CTCGCCTTCG TCGCCGAGAC GCCCGGAAAG GTCGGTAAGC GCGAAATCGC CAAGGCCTTC
GGCATCTCCG GCGCCGACAA GATCGGCCTC AAGGCGATCC TGAAGGAGAT CGAGGCCGAG
GGCGCGCTCG AGCGCGACCG CGGCGGTTTG CGGAAAGGCG GCAGCCTGCC GCCGGTCGTG
CTCGCCGACA TCGTGTCGCG CGATCGCGAC GGCGACCTGA TCGCCCGCCC GGCGCAGTGG
GACGGGGAGG GCGAGGCGCC CAAGATCGCC GTCGAGACCC CGCGTGCCGG CCGCAAGGGC
AACCGCCCCG CCCCCGGCAT CGGCGACCGG GCGCTGGTCC GCGTCGCACC CGACCCGGAA
GCGCCCGGCC GCTACAGCGG CCGCGTCATC AAGGTGATCG GCAAGAACCG CTCCGAAGTG
ATCGGCGTCT ATCGCGCCGG CCGCGACGGC GGGCGCCTGC TTCCTGTCGA GAAGAAATCG
CAGGGTAAGG AAATCGCGAT CCCGCCGGGC GAGGAGGGCG AGGCCCGGGA TGGCGACCTC
GTCAGCGTCG CGGTGGAGCG CGAGACCCGC TTCGGCCTGC CCCGCGGGCG CGTCACCGAG
CGGCTCGGCG CGCTCGGCTC CGAGAAGGCG GTGAGCCTGA TCGCGCTGCA CATCCACAAT
ATCCCGCACG TCTTCCCCGC CGCCGTGCTG GCGGAGGCAG ACGCGGCCAA GCGCGCGACC
AAGCGCGGCC GCGAGGATTG GCGCGAGGCG CCGCTGGTCA CCATCGACCC GCCCGACGCC
AAGGACCACG ACGACGCGGT GATGGCTGAG GCCGATCCCG ATCCGGCCAA TGCGGGCGGC
TTCATCCTCA CCGTCGCGAT CGCGGATGTG GCCGCCTATA TCCGGCCGGA TTCAGCCCTC
GACCGCGAGG CGCTGCTGCG GGGCAACTCG GTCTACTTCC CCGACCGGGT GGTACCGATG
CTGCCCGAGC GCATTTCGAA CGATCTCTGC TCGCTGCGCG AAGGGGAGGA CCGCCCGGCG
CTCGCCGTGC GGATGATCAT CGGCGCCGAC GGGGTGAAGC GCAGCCACAG CTTCCACCGC
ATCCTGATGC GCTCGCACGC CAAGCTCGCC TATGCGCAGG CGCAGGCCGC GATCGACGGC
CGGCCGGACG AGAAATCGCG ACCGGTGCTG GAGACCGCGC TCCGCCCGCT CTACGCGGCC
TACGAGGCGA TGAAGCGGGC CCGCGATGCC CGCGGCCCGC TCGCCCTCGA TCTGCCGGAG
CGCAAGGTGC TGCTCGACGC GGAGGGCGGC GTCGATCGGG TGATCGTGCC GGAGCGTCTG
GAGGCGCATC GGCTGATCGA GGAGTTCATG ATCCAGGCCA ACGTCGCGGC GGCCGAGACC
CTCGAGAAGG CGGGCTCGCC GCTGATTTAC CGGGTTCACG ATGAGCCGGC CCTGGAGAAG
ATGCGCGCGC TCGGCGAGGT GCTCGCCTCG GTCGGCGTCA AGATGACCAA GGCCGGGGCG
CTGCGGCCGG ACCTGTTCAA TCGCATCCTC GCCCAGGTGG CCGAGAGTGA GCACGCTCCG
TTCATCAACG AAGTCGTGCT GCGTTCGCAG GCACAGGCGA TCTACGCTGC ACAGAATTTA
GGCCATTTCG GCCTCAACCT GCGCCGCTAC GCCCACTTCA CCTCGCCTAT CCGCCGCTAC
GCGGATCTCA TCGTCCACCG TGCTCTCGTG CGTGCCTGCG GATTGGGCAA GGATGGCCTG
CCGGACGACA CTACGCCGGG TATGCTCGAC GCGGTCTCCG AGCAGATCTC GGCGGCCGAG
CGCCGGGCGA TGGCGGCCGA GCGCGAGACC ATCGACCGGC TCATCGCCGG CTACCTCGCC
GACCGGGTCG GCGCGACTTT CACCGGCCGG ATCTCCGGGG TGACGCGCTC GGGGCTGTTC
GTGAAGCTCG CCGAGACCGG GGCCGACGGG TTCGTGCCCG TCTCCACCAT CGGCCACGAA
TATTACCGCC ACGACGAGGC CCTGCACGCG CTCGTCGGCG ACCGCAGCGG CGAGACCTAC
CGCCTCGGCG ACACGGTCGA GGTCCGCCTC GTCGAGGCGG CGGCGGTGGC CGGCGCTCTG
CGCTTCGAGA TTCTTTCGGA GGGGCGCAGC CGTTCCGGCG CCAAAGGCGG CGGGTTCAAG
CGCAGCGGGT CCAAGGCGAG TCCGGGCAAG GCGAAGTTGG GCAAGGCCAA GTTCGGTGCA
AAGTCGCCCA AGGGCAAGCC GCGCCCCGGC AAGACGGCGG CGTCCGAGAG CGATGCGGCG
CGGCGCCATC GCGGCTCGCG TCGCTGA
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| Protein sequence | MARRINPTAG TPVLPSREQI LAFVAETPGK VGKREIAKAF GISGADKIGL KAILKEIEAE
GALERDRGGL RKGGSLPPVV LADIVSRDRD GDLIARPAQW DGEGEAPKIA VETPRAGRKG
NRPAPGIGDR ALVRVAPDPE APGRYSGRVI KVIGKNRSEV IGVYRAGRDG GRLLPVEKKS
QGKEIAIPPG EEGEARDGDL VSVAVERETR FGLPRGRVTE RLGALGSEKA VSLIALHIHN
IPHVFPAAVL AEADAAKRAT KRGREDWREA PLVTIDPPDA KDHDDAVMAE ADPDPANAGG
FILTVAIADV AAYIRPDSAL DREALLRGNS VYFPDRVVPM LPERISNDLC SLREGEDRPA
LAVRMIIGAD GVKRSHSFHR ILMRSHAKLA YAQAQAAIDG RPDEKSRPVL ETALRPLYAA
YEAMKRARDA RGPLALDLPE RKVLLDAEGG VDRVIVPERL EAHRLIEEFM IQANVAAAET
LEKAGSPLIY RVHDEPALEK MRALGEVLAS VGVKMTKAGA LRPDLFNRIL AQVAESEHAP
FINEVVLRSQ AQAIYAAQNL GHFGLNLRRY AHFTSPIRRY ADLIVHRALV RACGLGKDGL
PDDTTPGMLD AVSEQISAAE RRAMAAERET IDRLIAGYLA DRVGATFTGR ISGVTRSGLF
VKLAETGADG FVPVSTIGHE YYRHDEALHA LVGDRSGETY RLGDTVEVRL VEAAAVAGAL
RFEILSEGRS RSGAKGGGFK RSGSKASPGK AKLGKAKFGA KSPKGKPRPG KTAASESDAA
RRHRGSRR
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