Gene Mchl_2648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2648 
Symbol 
ID7117398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2781642 
End bp2782685 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content71% 
IMG OID643525394 
ProductSel1 domain protein repeat-containing protein 
Protein accessionYP_002421416 
Protein GI218530600 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0668923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGACCC TGTCCCTCGC GGTCCTGAGC GCCTGCGTCG TTCTCGCGCT CGATAGCGGC 
GCTCCGCACG CAGCCCCGAA GCAGCCCGCC CCGAAGGAGC CTGTCGGGCC GACGCCGGCC
AAGCCGAACC TGTTCGACCT CAAGCGTGAG CTGCCCTCGC CCTACTCGGC CAACGTCCAG
GGGGCGCAGC CCACGACGGC GAACCCGAAT GCGGATGCCG CCTACGGGGC CTATCAGCGC
GGTCGCTACG TCACCGCCTT CCGCGAGGCG ACCAAGCGGA TCGAGGCGAA TCCGAAGGAC
GCCGCGGCGA TGACGCTGCT CGGCGAACTC TACAACCAGG GACTCGGGGT CAAGCCGGAT
CCCAAACGCG CCCACGAATG GTACCGGCTG GCGGCCGTGC AGAACGATCC CAACGCCATG
GCCTCCCTCG GCCTGATGGC GATGGACGGG CGCGGACAGC CCAAGGACGA GAAGGCCGGT
CGGACCTGGC TCGAACAGGC CGCCCGCAAG GGACAGCCCA GCGCCTGCTA CAATCTCGCT
CTGATCCAGC TCGCGAGCGA CAAGCCGGCG GATCTGGCCG CGGCCCTGGC CAATTTCCGG
GCGGCAGCCG AGGCCGAGAT CCCCGCCGCG CAATATGCGC TGGGTGTGCT CTACCTCCAG
GGCAAGGGCG TCTCCAAGGA CACGACCCAG GCCGCGCAAT GGTTTCGCCG TGCCGCCGAC
AACGGCGATC TCGGCGCCGA GGTCGAGTTC GCGATCCGGC TGTTCAACGG CGATGGCGTT
CCCAAGGACG AGACCCGCGC GGCCCGCTAC TTCCTGCACG CGGCCCAGCG CGGCAACGCC
ATCGCCCAGA ACCGGATCGC CAAGCTCTAC GTCGCCGGCC GCGGCGTGCC CAAGAATCTG
GTCGAGGCGG CGGCCTGGAA CCTCACCGCA GCCTCGCAGG GCCGCGCCGA TGCCGGCCTC
GATCAGGCGA CCGCCGGCCT CAACCCGGAC GAGCGCAAGC GCGCCGAGGC GCTGGCGGCG
GACCGGGTGA GCCTTGCGCC CTAA
 
Protein sequence
MGTLSLAVLS ACVVLALDSG APHAAPKQPA PKEPVGPTPA KPNLFDLKRE LPSPYSANVQ 
GAQPTTANPN ADAAYGAYQR GRYVTAFREA TKRIEANPKD AAAMTLLGEL YNQGLGVKPD
PKRAHEWYRL AAVQNDPNAM ASLGLMAMDG RGQPKDEKAG RTWLEQAARK GQPSACYNLA
LIQLASDKPA DLAAALANFR AAAEAEIPAA QYALGVLYLQ GKGVSKDTTQ AAQWFRRAAD
NGDLGAEVEF AIRLFNGDGV PKDETRAARY FLHAAQRGNA IAQNRIAKLY VAGRGVPKNL
VEAAAWNLTA ASQGRADAGL DQATAGLNPD ERKRAEALAA DRVSLAP