| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_2566 |
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| Symbol | |
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| ID | 7117313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | + |
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| Start bp | 2698666 |
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| End bp | 2700615 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643525314 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002421336 |
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| Protein GI | 218530520 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0181477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCA TTTACGGCCG CCGAGAGCTC CTGAGCGGTA TCGTACCGAG CTATACCGAC
CCGGAAGCCT GCATCCGTCA GATCGGGGAG TTGCAGAAGC AGATCCCGTC GCTCTACGCG
CTGCTCTCCG TCAACGCCTG CGCCCTCGCA TTCACCCATT ACCCACTTGC GCCGGCTTGG
CTGACCGTCG GGCTGCCCGG CGCGATGATC GGCCTGTGTG TGGTGCGGGC CACGCATTGG
TGGCATCTCC GGCCGCAGTC GATCTCCGGA GAAGAGGCCG TCAAACGGCT GCGCGGCACC
AGCCTCCTCA CCGTCCTGTT CTCGGCCCTC TTCGTCGGCT GGGCGATGAA GCTCACGTCC
TATGGCGGAC CGTTCGAACA GGGTCATGTC GCGATCTTCG TCGCGATCAC CGTCATCGCC
TGCATCTTCT GCCTGACGCA TCTGCCGGCC GCGGCGCTCG TCGTGACGAT CATCGTCATG
GGCAGCTTCC TGATTCACTG CTTCACGAGC GGCAACAGCG TCTTCATCGC GATCGCGCTG
AACACCGCCT TCGTCACGGT GGTGATGGTG CGCATCCTCA CCAACAACTT CCTGGCCTTC
CTCCAACTGC TCGAGTCCAA GGCCGAAGCC CAGCGGCTCG GCGAGGAGAA CCAGCGCCTG
GCGCATACCG ACAGCCTGAC CGGGTTGCCC AATCGGCGCT ATTTCTTCCA GCGCCTCGAT
GCGCTGATCG CCGCCTCGGC GACCGGAAAC GCCGCCTTCG CCCTCGCAAT CTTCGACCTC
GACCGGTTCA AGCCGATCAA CGACACGTTC GGCCACACCG CCGGAGACCG GGTGCTGGAA
GAGACCGGGC GCCGTCTCAG CGCCTTCGCC GCGGATGGCG TGACGATTGC GCGCCTCGGC
GGCGACGAGT TCGGCGTGCT GATCCACGGG GCCGACCGCA CGGCCGACGC GGTCGAGCTT
TGCAACCGCA TCTGTACGGC GCTGCAGGCG CCGATTTCGC TCGGCGAGAC CCACGTCGTG
CCGGGATGCT CCGGCGGCCT GGCGCTGTAT CCCAGCGCCG GACGGGCCGC GGATGCGCTG
TTCGACCGGG CCGATTATGC GCTCTACCAT TCCAAGGAGC GTAAGCGCGG GACCACGACC
CTGTTCTCGC AGGAGCATGA GGACGCGATC CGGGCCGAGC GCGCGGTGGA GGCCGCCCTC
CAGAGCGCGG ATCTCGCCGC CGAGATGGAG ATGCACTACC AGCCGATCCT CGACACGGTG
ACGGACCGCA TCACAACGGT CGAGGCGCTG GCGCGCTGGA CGAGCCCCAA GCTCGGGCGC
GTGCCGCCCG ACCGCTTCAT CGCCGTGGCG GAGCGCTGCG GCATGATCCA CTCGGTGACC
CTGCTGCTCC TGCGCAAGGC GCTCGCCGAC GCGGCCCGGC TCCCGGACGA CGTCGGATTG
TCGTTCAACC TCTCCTCGCA TGATCTCGCC TCGCCCGAGA CGGTCATCGC GATCCTCGCC
GCGGTCCGGC AGAGCGGGCT CGATCCCCGG CGGATCACGC TGGAGCTGAC GGAGACCGCG
CTGATGCGCG ACTTCGAGGG AGCGCAAAAG GCGATCACGC TCCTGCGCGC ACTCGGCATC
AAGATCGCGC TGGACGATTT CGGGACGGGG TATTCGAGCC TGAACTACGT CCACCGCCTG
CCGCTGGACC GGATCAAGAT CGACCGCGGC TTCATGGCCG ACGTCGAATC CGACCTCGGG
CGCAGCGTCG TGATCACGAT CCTCGATCTC TGCCAGAATC TCGGCCTGGA CGGCATCGCC
GAGGGGATCG AGACCACGGA GCAACTGAGC GCGGTGCGCC GTCACGGCTG TCGCTACGTT
CAGGGCTACC TGATCGGGGT GCCGATGCCG ATGACGGACC TGCTCGGCGG CCTTCGCGGC
GCGGCGGAGG CCGAGCCGGT CTCCGCCTGA
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| Protein sequence | MKFIYGRREL LSGIVPSYTD PEACIRQIGE LQKQIPSLYA LLSVNACALA FTHYPLAPAW
LTVGLPGAMI GLCVVRATHW WHLRPQSISG EEAVKRLRGT SLLTVLFSAL FVGWAMKLTS
YGGPFEQGHV AIFVAITVIA CIFCLTHLPA AALVVTIIVM GSFLIHCFTS GNSVFIAIAL
NTAFVTVVMV RILTNNFLAF LQLLESKAEA QRLGEENQRL AHTDSLTGLP NRRYFFQRLD
ALIAASATGN AAFALAIFDL DRFKPINDTF GHTAGDRVLE ETGRRLSAFA ADGVTIARLG
GDEFGVLIHG ADRTADAVEL CNRICTALQA PISLGETHVV PGCSGGLALY PSAGRAADAL
FDRADYALYH SKERKRGTTT LFSQEHEDAI RAERAVEAAL QSADLAAEME MHYQPILDTV
TDRITTVEAL ARWTSPKLGR VPPDRFIAVA ERCGMIHSVT LLLLRKALAD AARLPDDVGL
SFNLSSHDLA SPETVIAILA AVRQSGLDPR RITLELTETA LMRDFEGAQK AITLLRALGI
KIALDDFGTG YSSLNYVHRL PLDRIKIDRG FMADVESDLG RSVVITILDL CQNLGLDGIA
EGIETTEQLS AVRRHGCRYV QGYLIGVPMP MTDLLGGLRG AAEAEPVSA
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