Gene Mchl_2565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2565 
Symbol 
ID7117312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2697075 
End bp2698385 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content71% 
IMG OID643525313 
ProductGeneral substrate transporter 
Protein accessionYP_002421335 
Protein GI218530519 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0129523 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTCGC CCGCAAGCGC CGCGCCCCCG CGCCTCGACC GCAAGGCCGT GGGAGCGGTC 
GTGCTCGGCA ACGCCCTCGA ATTCTACGAT TTCACGATCT ACGCCTTCTT CGCCAAGTCG
ATCGGCGCGA CCTTCTTTCC CTCGGACAGC CCGACCGACA GCCTGCTCGC CTCGCTCGCC
CTGTTCGGGA TCGGCTACGT CATGCGCCCG GTGGGCGGCG TGCTGATCGG CGCCTTCGCC
GACCGGGCCG GGCGCAAGCC CGCGATGCTC ATCACCATCG CGCTGATGGC GGTGGGCATG
CTGATGCTGG CGGCCTGCCC CGGCACGGCG GTGCTCGGCG TCTGGGCACA GGTGATCGTG
ATTGCCGGGC GGCTGATCCA GGGGCTGGCG CTTGGCGGCG AGGTCGGACC CTCCACCGCC
TTCCTGATCG AGGCGGCCCC GGCGCGGCAT CGCGGCTTCG TCGCGAGTTG GCAGATCGCG
AGCCAGGGCT GCGCCGCCCT GTTCGCCGGC CTGTTCGCCA CCGTGCTGAC CCTCGTGCTC
GGCGATGCGG CCATGGCCGA TTGGGGTTGG CGGCTGATGT TCGGTCTCGG CCTTCTCGTC
GTGCCGGTCG GCCTCGTGAT CCGCAGCCAC CTGCCGGAGA CGGCGGGCGA GGGGCACGAC
CCCGCCGCTG CCGATTCGAC GGGTGCGGTG CTCGGTCGGC TGCTGCGCCA GCACGGGCGG
ATGCTCGGGC TGACCTTCCT CGTCATCGCC GCCTCGACCG TCTCGAACGC GGTGGGCACC
AACATGCCGG TCTATGCCGG GGCGACGCTC GGGCTCTCGG AAATGGCGGC CAACGCCGTG
CCGATCGCCC TGGGGCTGGC CTCCGTGATC TTTCCGCTCC TCGGCGGTTG GCTCGCCGAC
CGGTTCGGGC GCAAGCCGGT GATGATCTGG CCGCGCGCCC TGATCCTGTT GCTCGCCGTG
CCAACCTTCC TATGGATGCT GGGCAGCCCA AGCGCGCTCA GCGTCTACGC CGTGACCTTC
CTGCTCTCGG CCCTGTCCTC GATCAACGCG GCGGCGATCA TCGTCGCCAT CCCCGAAGCC
CTGCCGCGGG CGGTGCGCAG CGCCGGGCTG TCGATCGTCT ACGCGCTTTC CGTTTCGATC
TTCGGCGGCA GCACGAACTA CGTCGTGAAC TGGCTGATCG CCGCCACCGG CGACCGGATG
GCGCCGGCCT ACTATCTCGC CGCCTTCAGC CTCGTCGGCA CGGTCGCCGC CCTGCTGCTG
CCGGAGACGC GGGGGCGGGA TATCCATGTC GACACGGCGA CGCGGCGGTG A
 
Protein sequence
MHSPASAAPP RLDRKAVGAV VLGNALEFYD FTIYAFFAKS IGATFFPSDS PTDSLLASLA 
LFGIGYVMRP VGGVLIGAFA DRAGRKPAML ITIALMAVGM LMLAACPGTA VLGVWAQVIV
IAGRLIQGLA LGGEVGPSTA FLIEAAPARH RGFVASWQIA SQGCAALFAG LFATVLTLVL
GDAAMADWGW RLMFGLGLLV VPVGLVIRSH LPETAGEGHD PAAADSTGAV LGRLLRQHGR
MLGLTFLVIA ASTVSNAVGT NMPVYAGATL GLSEMAANAV PIALGLASVI FPLLGGWLAD
RFGRKPVMIW PRALILLLAV PTFLWMLGSP SALSVYAVTF LLSALSSINA AAIIVAIPEA
LPRAVRSAGL SIVYALSVSI FGGSTNYVVN WLIAATGDRM APAYYLAAFS LVGTVAALLL
PETRGRDIHV DTATRR