Gene Mchl_2503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2503 
Symbol 
ID7114489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2630105 
End bp2632522 
Gene Length2418 bp 
Protein Length805 aa 
Translation table11 
GC content71% 
IMG OID643525251 
Productdiguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 
Protein accessionYP_002421273 
Protein GI218530457 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.080516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCATCC CGACCTCAGA CGCGTCCGCC GCCGCGCTGG TCCAGCACTG GCGCAGTTGC 
CGGTCCCGCC CCGGGGCGAC GCCGGGTTAC GATGCCGTCG TCCTGGGCAG GCTCGGCCGT
CTGGCCGACC GCTGCGCCCT GGTCGCCACC CGCGAAGGCC GGGCCGAACG CATTCTCTGG
GGTGGCACGG GATTTCGCGA CTGGTTCGAG GACGAGATCC GCGACCGGCC ACTCGTGCAG
ATGCCCGATG AGATCCGCCG GCCGATCGAG GAGATCGGGA TCGCCGCCCT GCGCACCGGT
GAGCCGGCCG GGGCCCGCTG CGACCGCATC ACCGACGGCG TCGTCACCAC CTGGAATCTC
GTCGGCGTCC CGCTCGCCAA CGGCAGTGGA ACGCCGCTCC TCCTCGTCCA CGTCGACAGC
GAGGGCGTGC GCACCGAGCT GATGCAGGCG ATGTTCGGCG CGACCGGCCA GGGCCTGATG
GCGCTCGGCG CGATCCGTGA GGCATCGGGT GCGGTCGCGG ACTTCAAGAT CGTCGCCCTC
AATCAGGGCG CCGCGGAGAT TCTCGGGCGG CCAGTCGCGA GCCTGCAATG GCAGCGGCTG
GGCGATCTCG TGCCCGTTCG GCTCGGCGTG ACGCAGCGGC TGTCGGGCGT GCTGGGATGC
GCCGACCGGG CGACGTTCGA ACTCGCCGTG CCGCGCGCCG ACCGGACGAC GCTGCACCTG
AAGGTGGAGG CGCAGGCCAT CGGCGATCTC GTCGCCGTCG CCATGACCGA TGTCGGGGAC
ATTAAGGCGC GTGAGGCCTC GTTCCGGTTC CTGTTCGAGA GCAACCCGCT GCCGATGTGG
CTGGTCGATC AGGATTCGGC CCGCTTCGTC GCCGTGAACG AGGCGGCGGT CGCCCATTAC
GGCTACAGCC GCGAAGCCTT CCTGGCCCGG GGCCTGCAGG ACCTATCGGA AGCCGTCGCG
TTCAGTTTTG CCCGCGACGG CCGCCTGCAC CGCCATCGTC GGGCCGACGG CTCGTTGATC
GACGTGACGC TGTTCGAGCG CAGCCTCGCC TTCGAAGGTC GCCCAGCCGT ACTCGGCGCG
GCCATCGACG TCACCGAGCA GCGCCGCGCC GAGGCGCGCA TCACCCACAT GGCCCACCAC
GATGCGCTGA CGGGCCTGCC GAACCGGGCG CTGTTCACGA CCTGCCTCGC GGAGGTGATC
GCCGAGCACG CCCGCACCGG CGCGGGCGCG GGCGCCGCCC TGCTCTGCCT CGACCTCGAC
AAGTTCAAGC TCGTCAACGA CACCCTCGGC CACCCGGCGG GCGACACCCT GCTCCGAGCG
GTGGCGGACC GGATCACGGC ATGTCTGCAC GGGGAGGATC TGGTCGCGCG CCTCGGCGGC
GACGAGTTCG CGGTTCTGCT GCGCACCCCC GACGCCGGGA CCGTGTCCGC CGTCGCCGGC
CGGATCATCG AGGCGCTGTC CCATCCGGTC AGGCTCGGCG ACCGGGAGTG CCAGATCGGC
GTGAGCGTCG GCATAGCCTG CCTGCCCGAG CACGGAACCG ATTCCGATAC CCTGCTGCGC
CACGCCGACC TCGCTCTCTA CCGGGCGAAG GCGGATGGCG GCAGCATCGC CCATTGTTTC
GAGGCGGCGA TGGACAGTTG GGACCGGTCC CGGCGCCGAC GGGAGGCCGA CTTGCACGAG
GCCTTCGCCC GGGGCGATCT CGCGCTCGCC TACCAGCCGG TCGTCGGCGT CCGCTCGCGG
GCGATCGTCG GGTTCGAGGC GCTGCTGCGC TGGCACCACC CGGTCGAGGG AGCGATCCCG
CCGTCCGAAT TCGTGCCGCT CGCCGAGGAA ACGGGCCTGA TCGTGCCGAT CGGCGCCTGG
GTGCTGCGGC AAGCCTGCGC CGAGGCGAGC CTGTGGGCCG ATCCGGTTCG GATCGCGGTG
AACCTCTCGC CGGTGCAGTT CCGCGACCCC GGCCTCGTTG CGACGGTGCG TGAGGCGCTC
GCCCTTTCCG GGCTCGCTCC GCACCGGCTC GAACTGGAGG TCACCGAATC GGTGCTGCTG
GCCGCGAGCG AGGCCAACGT CGCGACGCTG CATGCCCTGC GGGATCTCGG CGTACGGATT
GCGATGGACG ATTTCGGAAC GGGCTATTGT TCGTTGAGCT ACCTGCAGAA ATTTCCCTTC
GACAAGATCA AGATCGACCG CTCGTTCGTA AGCCGGCTCG GCGAGGATCC GCACTCGACC
GCGATCGTGC AGGCGGTGAT CGGCCTCGGC GCAAGCCTCG GCATCGTCAC CGTGGCCGAG
GGTGTCGAGA CCGAAGTCCA GTTCGCCCAT CTGCGGGCCG AGGGCTGCGA GGAGGTGCAG
GGCTACCTGT TCGGTCGGCC GATCCCCGCA CCGCAGGCCG TCGGGCCGAT TCGGCGGGAG
GCGGACGTCG CCGCGTGA
 
Protein sequence
MPIPTSDASA AALVQHWRSC RSRPGATPGY DAVVLGRLGR LADRCALVAT REGRAERILW 
GGTGFRDWFE DEIRDRPLVQ MPDEIRRPIE EIGIAALRTG EPAGARCDRI TDGVVTTWNL
VGVPLANGSG TPLLLVHVDS EGVRTELMQA MFGATGQGLM ALGAIREASG AVADFKIVAL
NQGAAEILGR PVASLQWQRL GDLVPVRLGV TQRLSGVLGC ADRATFELAV PRADRTTLHL
KVEAQAIGDL VAVAMTDVGD IKAREASFRF LFESNPLPMW LVDQDSARFV AVNEAAVAHY
GYSREAFLAR GLQDLSEAVA FSFARDGRLH RHRRADGSLI DVTLFERSLA FEGRPAVLGA
AIDVTEQRRA EARITHMAHH DALTGLPNRA LFTTCLAEVI AEHARTGAGA GAALLCLDLD
KFKLVNDTLG HPAGDTLLRA VADRITACLH GEDLVARLGG DEFAVLLRTP DAGTVSAVAG
RIIEALSHPV RLGDRECQIG VSVGIACLPE HGTDSDTLLR HADLALYRAK ADGGSIAHCF
EAAMDSWDRS RRRREADLHE AFARGDLALA YQPVVGVRSR AIVGFEALLR WHHPVEGAIP
PSEFVPLAEE TGLIVPIGAW VLRQACAEAS LWADPVRIAV NLSPVQFRDP GLVATVREAL
ALSGLAPHRL ELEVTESVLL AASEANVATL HALRDLGVRI AMDDFGTGYC SLSYLQKFPF
DKIKIDRSFV SRLGEDPHST AIVQAVIGLG ASLGIVTVAE GVETEVQFAH LRAEGCEEVQ
GYLFGRPIPA PQAVGPIRRE ADVAA