Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_2503 |
Symbol | |
ID | 7114489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 2630105 |
End bp | 2632522 |
Gene Length | 2418 bp |
Protein Length | 805 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643525251 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_002421273 |
Protein GI | 218530457 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.080516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCCATCC CGACCTCAGA CGCGTCCGCC GCCGCGCTGG TCCAGCACTG GCGCAGTTGC CGGTCCCGCC CCGGGGCGAC GCCGGGTTAC GATGCCGTCG TCCTGGGCAG GCTCGGCCGT CTGGCCGACC GCTGCGCCCT GGTCGCCACC CGCGAAGGCC GGGCCGAACG CATTCTCTGG GGTGGCACGG GATTTCGCGA CTGGTTCGAG GACGAGATCC GCGACCGGCC ACTCGTGCAG ATGCCCGATG AGATCCGCCG GCCGATCGAG GAGATCGGGA TCGCCGCCCT GCGCACCGGT GAGCCGGCCG GGGCCCGCTG CGACCGCATC ACCGACGGCG TCGTCACCAC CTGGAATCTC GTCGGCGTCC CGCTCGCCAA CGGCAGTGGA ACGCCGCTCC TCCTCGTCCA CGTCGACAGC GAGGGCGTGC GCACCGAGCT GATGCAGGCG ATGTTCGGCG CGACCGGCCA GGGCCTGATG GCGCTCGGCG CGATCCGTGA GGCATCGGGT GCGGTCGCGG ACTTCAAGAT CGTCGCCCTC AATCAGGGCG CCGCGGAGAT TCTCGGGCGG CCAGTCGCGA GCCTGCAATG GCAGCGGCTG GGCGATCTCG TGCCCGTTCG GCTCGGCGTG ACGCAGCGGC TGTCGGGCGT GCTGGGATGC GCCGACCGGG CGACGTTCGA ACTCGCCGTG CCGCGCGCCG ACCGGACGAC GCTGCACCTG AAGGTGGAGG CGCAGGCCAT CGGCGATCTC GTCGCCGTCG CCATGACCGA TGTCGGGGAC ATTAAGGCGC GTGAGGCCTC GTTCCGGTTC CTGTTCGAGA GCAACCCGCT GCCGATGTGG CTGGTCGATC AGGATTCGGC CCGCTTCGTC GCCGTGAACG AGGCGGCGGT CGCCCATTAC GGCTACAGCC GCGAAGCCTT CCTGGCCCGG GGCCTGCAGG ACCTATCGGA AGCCGTCGCG TTCAGTTTTG CCCGCGACGG CCGCCTGCAC CGCCATCGTC GGGCCGACGG CTCGTTGATC GACGTGACGC TGTTCGAGCG CAGCCTCGCC TTCGAAGGTC GCCCAGCCGT ACTCGGCGCG GCCATCGACG TCACCGAGCA GCGCCGCGCC GAGGCGCGCA TCACCCACAT GGCCCACCAC GATGCGCTGA CGGGCCTGCC GAACCGGGCG CTGTTCACGA CCTGCCTCGC GGAGGTGATC GCCGAGCACG CCCGCACCGG CGCGGGCGCG GGCGCCGCCC TGCTCTGCCT CGACCTCGAC AAGTTCAAGC TCGTCAACGA CACCCTCGGC CACCCGGCGG GCGACACCCT GCTCCGAGCG GTGGCGGACC GGATCACGGC ATGTCTGCAC GGGGAGGATC TGGTCGCGCG CCTCGGCGGC GACGAGTTCG CGGTTCTGCT GCGCACCCCC GACGCCGGGA CCGTGTCCGC CGTCGCCGGC CGGATCATCG AGGCGCTGTC CCATCCGGTC AGGCTCGGCG ACCGGGAGTG CCAGATCGGC GTGAGCGTCG GCATAGCCTG CCTGCCCGAG CACGGAACCG ATTCCGATAC CCTGCTGCGC CACGCCGACC TCGCTCTCTA CCGGGCGAAG GCGGATGGCG GCAGCATCGC CCATTGTTTC GAGGCGGCGA TGGACAGTTG GGACCGGTCC CGGCGCCGAC GGGAGGCCGA CTTGCACGAG GCCTTCGCCC GGGGCGATCT CGCGCTCGCC TACCAGCCGG TCGTCGGCGT CCGCTCGCGG GCGATCGTCG GGTTCGAGGC GCTGCTGCGC TGGCACCACC CGGTCGAGGG AGCGATCCCG CCGTCCGAAT TCGTGCCGCT CGCCGAGGAA ACGGGCCTGA TCGTGCCGAT CGGCGCCTGG GTGCTGCGGC AAGCCTGCGC CGAGGCGAGC CTGTGGGCCG ATCCGGTTCG GATCGCGGTG AACCTCTCGC CGGTGCAGTT CCGCGACCCC GGCCTCGTTG CGACGGTGCG TGAGGCGCTC GCCCTTTCCG GGCTCGCTCC GCACCGGCTC GAACTGGAGG TCACCGAATC GGTGCTGCTG GCCGCGAGCG AGGCCAACGT CGCGACGCTG CATGCCCTGC GGGATCTCGG CGTACGGATT GCGATGGACG ATTTCGGAAC GGGCTATTGT TCGTTGAGCT ACCTGCAGAA ATTTCCCTTC GACAAGATCA AGATCGACCG CTCGTTCGTA AGCCGGCTCG GCGAGGATCC GCACTCGACC GCGATCGTGC AGGCGGTGAT CGGCCTCGGC GCAAGCCTCG GCATCGTCAC CGTGGCCGAG GGTGTCGAGA CCGAAGTCCA GTTCGCCCAT CTGCGGGCCG AGGGCTGCGA GGAGGTGCAG GGCTACCTGT TCGGTCGGCC GATCCCCGCA CCGCAGGCCG TCGGGCCGAT TCGGCGGGAG GCGGACGTCG CCGCGTGA
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Protein sequence | MPIPTSDASA AALVQHWRSC RSRPGATPGY DAVVLGRLGR LADRCALVAT REGRAERILW GGTGFRDWFE DEIRDRPLVQ MPDEIRRPIE EIGIAALRTG EPAGARCDRI TDGVVTTWNL VGVPLANGSG TPLLLVHVDS EGVRTELMQA MFGATGQGLM ALGAIREASG AVADFKIVAL NQGAAEILGR PVASLQWQRL GDLVPVRLGV TQRLSGVLGC ADRATFELAV PRADRTTLHL KVEAQAIGDL VAVAMTDVGD IKAREASFRF LFESNPLPMW LVDQDSARFV AVNEAAVAHY GYSREAFLAR GLQDLSEAVA FSFARDGRLH RHRRADGSLI DVTLFERSLA FEGRPAVLGA AIDVTEQRRA EARITHMAHH DALTGLPNRA LFTTCLAEVI AEHARTGAGA GAALLCLDLD KFKLVNDTLG HPAGDTLLRA VADRITACLH GEDLVARLGG DEFAVLLRTP DAGTVSAVAG RIIEALSHPV RLGDRECQIG VSVGIACLPE HGTDSDTLLR HADLALYRAK ADGGSIAHCF EAAMDSWDRS RRRREADLHE AFARGDLALA YQPVVGVRSR AIVGFEALLR WHHPVEGAIP PSEFVPLAEE TGLIVPIGAW VLRQACAEAS LWADPVRIAV NLSPVQFRDP GLVATVREAL ALSGLAPHRL ELEVTESVLL AASEANVATL HALRDLGVRI AMDDFGTGYC SLSYLQKFPF DKIKIDRSFV SRLGEDPHST AIVQAVIGLG ASLGIVTVAE GVETEVQFAH LRAEGCEEVQ GYLFGRPIPA PQAVGPIRRE ADVAA
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