| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_2454 |
|---|
| Symbol | |
|---|
| ID | 7113810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 2589523 |
|---|
| End bp | 2590542 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643525201 |
|---|
| Product | DNA-directed RNA polymerase subunit alpha |
|---|
| Protein accession | YP_002421224 |
|---|
| Protein GI | 218530408 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
|---|
| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.13292 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCATTC AGAAGAACTG GCAAGAGCTC ATCAAGCCGA ACAAGCTGCA GGTGACGGCC
GGCGACGATC CCAAGCGGGT CGCCACCGTC GTGGCCGAGC CGCTCGAGCG CGGCTTCGGC
ACGACGCTCG GCAACAGCCT GCGCCGCGTG CTGCTCTCCT CGCTTCAGGG CGCTGCCGTC
ACCTCCGTCC AGATCGACGG CGTGCTGCAC GAGTTCTCGT CGATCCCCGG CGTGCGTGAG
GACGTGACCG ACATCGTCCT CAACATCAAG ACCATCGCCA TCCGCTCGCA GACCGACCAG
CCCAAGCGCA TGACCCTGCG CAAGACGGGC CCGGGCCTCG TCACCGCGGG CGACATCGGC
GCCGTCGGCG ACATCCAGAT CCTGAACCCC GACCTCGTGA TCTGCACCCT GGACGACGGG
GCCGAGATCC GCATGGAGTT CACGGTCGCC ACGGGCAAGG GCTATGTCCC GGCCGAGCGC
AACCGCCCCG AAGATGCGCC GATCGGCCTG ATCCCGGTCG ATGCGCTCTA CTCGCCGGTG
ACTAAGGTCA GCTACCGCGT CGAGACCACC CGCGAGGGCC AGGATCTCGA CAAGGACAAG
CTGACGATAA CGCTCGAGAC CAACGGCGCC GTGTCGCCGG AGGATGCGCT GGCCTACGCC
GCTCGCATCA TCCAAGACCA GCTCCAGGTC TTCGTGAACT TCGAGGAGCC CCGCAAGGAA
GAGGCCGCGC CGCTCGCGCC GCAGCTCCCC TTCAACCCGG CGCTGCTCAA GAAGGTGGAC
GAGCTCGAAC TGTCGGTCCG TTCGGCGAAC TGCCTGAAGA ACGACAACAT CGTCTATATC
GGCGACCTCA TCCAGAAGTC GGAGGGCGAG ATGCTGCGCA CCCCGAACTT CGGCCGCAAG
TCGCTCAACG AGATCAAGGA AGTGCTCGCC GGCATGGGCC TGCACCTCGG CATGGACGTT
CCCGGCTGGC CGCCGGAGAA CATCGAGGAT CTCGCCAAGC GCTTCGAAGA GCACTACTGA
|
|---|
| Protein sequence | MVIQKNWQEL IKPNKLQVTA GDDPKRVATV VAEPLERGFG TTLGNSLRRV LLSSLQGAAV
TSVQIDGVLH EFSSIPGVRE DVTDIVLNIK TIAIRSQTDQ PKRMTLRKTG PGLVTAGDIG
AVGDIQILNP DLVICTLDDG AEIRMEFTVA TGKGYVPAER NRPEDAPIGL IPVDALYSPV
TKVSYRVETT REGQDLDKDK LTITLETNGA VSPEDALAYA ARIIQDQLQV FVNFEEPRKE
EAAPLAPQLP FNPALLKKVD ELELSVRSAN CLKNDNIVYI GDLIQKSEGE MLRTPNFGRK
SLNEIKEVLA GMGLHLGMDV PGWPPENIED LAKRFEEHY
|
|---|
| |