| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_2312 |
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| Symbol | |
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| ID | 7116890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | - |
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| Start bp | 2432679 |
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| End bp | 2434652 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643525062 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_002421086 |
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| Protein GI | 218530270 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.623811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.165216 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAGC GCACCCTCAA GACGGCGGTG ATGGTCGTCC ACGATCTCGC CGCGACCGCG
GCGGCCGTGG TGCTGACCTT CGTCTTCCGC TTTCAGGACG GGGCCCTGGC CGAGCGCCTG
CATGCGCTGC CGCTGCTGCT GCCGCCGTTC CTGGCCTATG CCGGGCTGAT CTACGCGTGG
TTCCGGCTCT ACCGCACCAA GTGGCGCTTC GCCTCGCTGC CCGACCTCGC CGGCATCGTG
CGCGCCGCGA GCGTCACCGC GCTGACGCTG CTTGTGCTCG ACTACGTGCT GGTCTCCTCG
AATCTCTACG GGTTCTACTT CTTCGGCAAG GTCGCCATCG TCCTCTACTG GGTCTTGCAG
ATCTTCCTGC TTGGCGGGCC GCGGCTGGCC TTCCGCTACC TGAAATACGC CCGCTCCCGG
CAGAGCCAGG CCCGCACCGC CACCACGCCG ACGCTGCTGC TGGGCCGCGG CGCCGATATC
GAGATCGTGC TGCGGGCGAT CGAATCCGGC TCGGTCAAGC GGCTCTCCCC CAAGGGCATC
CTCTCGCCGC GGGCGGACGA GGCGGGCCAG ATGATGCGCG GCGTGCCCGT GCTCGGCGGG
TTTCGCGACC TCGAACAGGT GGTCGCGGAC CTCGCCAACC GTGGCCTGCC GGTGCGCCGG
CTCGTGGCGA CGCCGAGCGC GCTGGCGCCC GAATCCGAGC CCGACGATCT CATCGCCCGT
GCCCGCCGTC TCGGCCTGCC GCTCGCCCGC GTCACCAGCC TCGGCGAGGG GATGCGCGAT
GCCGAACTCG CGCCGCTGGA GATCGAGGAT CTGCTCCTGC GCCCCACCGT CGCCATCGAC
CGGCCGCGAC TCGAGCGCTT CCTCACCGGC GCCCGCGTCG TCGTCACGGG CGGCGGCGGC
TCGATCGGCG CCGAGATCTG CACCCGGGCG GTCGCCTTCG GCGCCTCGGC GCTGCTCGTC
ATCGAGAATT CGGAGCCGGC GCTGCATGCC GTCCTCAACG GGCCGGCCCT GCTCCACGCC
GAAGCCGCGG TCGAGGGTGC GCTCGCCGAC ATCCGCGACC GCGAGCGGCT GCACGCGATC
CTCCGCGATT TCCGGCCCAC TTACGTCTTC CACGCCGCCG CGCTGAAGCA GGTGCCCTAT
CTCGAGCGCG ACTGGGTCGA GGGCATTAAG ACCAACGTGT TCGGTTCGAT CAACGTCGCC
GAGGCGACGG TGGCCGCGGG CGCCCGCGCC CTGGTGATGA TCTCCACCGA CAAGGCGATC
GAACCGGTCT CGCAGCTCGG CGTCACCAAG CGCTTCGCCG AGATGGTCGC GCAGTCTCTC
GACGCGGAGC GCTCGGGCCC GGGGGCGACC CGGCTCATCG CCGTGCGCTT CGGCAACGTG
CTGGGCTCGG CCGGCTCCGT GGTGCCGGTG TTCAAGGCGC AGATCGCCCG CGGCGGGCCG
GTCACGGTGA CCCATGCCGA GATGGTGCGC TACTTCATGA CCGTACGCGA GGCCTCCGAC
CTCGTGCTCA CCGCCGCCTC CCACGCCGAC GCGGAAGGGC GCGGCGATAC CGGCGACCAG
CGCGCGGCGG TCTACGTGCT GAAGATGGGC CAGCCCGTAC GCATCCGGGA TCTGGCCGAG
CGGATGATCC GGCTCGCCGG CTTCGAGCCC GGCGAAGACA TCGAGATTCA GGTGACCGGC
GCGCGGCCGG GCGAGCGGCT CAACGAGATC CTGTTTGCCA AGGAAGAGCC GCGTGTGACG
CTCGCCGGCA TCGAAGGCGT CATGGCGGCC AAGCCCGTCT TCGCCGACCG CGCGGTACTG
GAAGGGTGGA TCGCTCGCCT GCGCGAGGCC GTCACGGCGG GCGACCGGGC GGCGGCGGAA
GCCGTGTTCG AGGAGGCGAT CCCGGATTTC CGCAATCGCG CCGGGGCCGT TCCGAACACC
AAGCCTGAGA CCATCGCGTC GCCGGCGGCA GCCACCGACG CGGCGACCGC CTGA
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| Protein sequence | MQKRTLKTAV MVVHDLAATA AAVVLTFVFR FQDGALAERL HALPLLLPPF LAYAGLIYAW
FRLYRTKWRF ASLPDLAGIV RAASVTALTL LVLDYVLVSS NLYGFYFFGK VAIVLYWVLQ
IFLLGGPRLA FRYLKYARSR QSQARTATTP TLLLGRGADI EIVLRAIESG SVKRLSPKGI
LSPRADEAGQ MMRGVPVLGG FRDLEQVVAD LANRGLPVRR LVATPSALAP ESEPDDLIAR
ARRLGLPLAR VTSLGEGMRD AELAPLEIED LLLRPTVAID RPRLERFLTG ARVVVTGGGG
SIGAEICTRA VAFGASALLV IENSEPALHA VLNGPALLHA EAAVEGALAD IRDRERLHAI
LRDFRPTYVF HAAALKQVPY LERDWVEGIK TNVFGSINVA EATVAAGARA LVMISTDKAI
EPVSQLGVTK RFAEMVAQSL DAERSGPGAT RLIAVRFGNV LGSAGSVVPV FKAQIARGGP
VTVTHAEMVR YFMTVREASD LVLTAASHAD AEGRGDTGDQ RAAVYVLKMG QPVRIRDLAE
RMIRLAGFEP GEDIEIQVTG ARPGERLNEI LFAKEEPRVT LAGIEGVMAA KPVFADRAVL
EGWIARLREA VTAGDRAAAE AVFEEAIPDF RNRAGAVPNT KPETIASPAA ATDAATA
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