Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_2278 |
Symbol | |
ID | 7114835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 2390548 |
End bp | 2392296 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643525028 |
Product | ABC transporter related |
Protein accession | YP_002421052 |
Protein GI | 218530236 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.682256 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGAAGG CCTTCCTCGC CTATTACCGG CCGCACCGGA TGCTGTTCCT GGTGGATTTC GGCTGCGCCG TGCTCTCGGG CCTGCTCGAA CTCGGCTTCC CGCTCGCGGT CAAAGCCTTC GTCGACCGGC TGCTGCCACA GCAGGACTGG GGCCTGATCC TGCTCGCGGC GATGGGCCTG ACGCTGCTCT ACGTCGCCAA TGCCGGCCTG ATGGTGGTCG TCACCTATTG GGGCCACGTG CTCGGCATCA ACATCGAGAC CGAGATGCGC GCCCGCGCCT TCGACCACCT GCAGAAGCTC TCGTTCCGCT TCTTCGACGG GCAGAAGACC GGCCATCTGG TGGCGCGCAT CACCAAGGAT CTGGAGGAGA TCGGCGAGGT CGCCCATCAC GGGCCCGAGG ACCTGTTCAT CGCGGTGATG ACGCTGTTCG GCGCCTTCGC GCTGATGTTC CTCGTCCACC CGCCACTGGC GCTGATGACG CTGGCGATCC TGCCGCTGAT CGCCTTCATC GTCATCCGCT ACGGCGGGCG CATGACGCGC AACTGGCAGG CGCAGTACGG GCGCGTCGGC GCCTTCAACG CTCGCATCGA GGAGAATGTC GGCGGCATCC GCGTAGTGAA AGCTTTTGCC AACGAGGCGC ATGAGCGGGC GCTGTTCGCC TCCGATAACC GGAACTACCG CACCACCAAG CTCGAAGCCT ACCGGCTGAT GGCGGGCGCC CTGTCGATCA ACTATCTCGG CCTGCGCCTC GTGCAGATCG TGGTGCTCCT CGGGGGCGCC GCCTTCGTGG TGCGCGGTGA CCTGACGCCC GGCGGCTTCG TCGGCTTCCT GCTCCTGGTG GCGGTGTTCT ACCGGCCGCT GGAAAAGATC GGGGCGGTGA TCGAGACCTA CCCGAAGGGC ATTGCCGGCT TTCGCCGCTA CCAGGACCTG CTCGCCACCG AGCCCGACAT CGCCGACCGG CCGGGGGCCA TTCCCGCCCC GCCGCTGAAG GGCGAGATCC GCTTCGAGGG CGTGCGCTTC GGCTACAGCC CGGACCGGCC GGTGCTCTCC GCGATCGACC TGACGATCCA CGCGGGCGAG ACGGTGGCCT TCGTCGGCCC CTCGGGGGCG GGCAAGACGA CGCTGCTCTC GCTGATCCCG CGCTTCTACG AGGCGGAAGC CGGGCGCATC ACCATCGACG GCCACGACAT CCGCGACCTG ACGCTGGCCT CGCTGCGCGG GCAGATCGGC ATCGTCCAGC AGGACGTGTT CCTGTTCGCC GGCACGATCC GCGAGAACAT CGCCTATGGC CGCCTGCGCG CGAGCGAGGC CGAGATCCTG GACGCCGCCG CCCGCGCCCG GCTCGATGGG CTGATCGCTT CGCTGCCCGA GGGGCTCGAC ACGGTGATCG GTGAGCGCGG CGTGAAGCTA TCAGGGGGGC AGAAGCAGCG GCTCGCCATC GCCCGCGCCT TCCTCAAGAA CCCGCCGATC CTGATCCTCG ACGAGGCGAC CTCGGCGCTG GACACGCAGA CCGAGCGGGA GATCCAGGCC TCGCTGTTCG AACTGGCGGA AGGCCGCACG ACGCTCGTCA TCGCCCACCG GCTCGCCACG ATCCGCCACG CCGACCGCAT CGTGGTGGTG GCCGAGAACG GCATCGTCGA GCAGGGCCGT CACGACGTGC TGCTGGCCGG AGACGGCTAC TACCGCCGCC TCCACGCGGC GCAGGTCGAG GATTCGCATC CGTCGCGGCC GCGCACGGCG GCGGAGTGA
|
Protein sequence | MLKAFLAYYR PHRMLFLVDF GCAVLSGLLE LGFPLAVKAF VDRLLPQQDW GLILLAAMGL TLLYVANAGL MVVVTYWGHV LGINIETEMR ARAFDHLQKL SFRFFDGQKT GHLVARITKD LEEIGEVAHH GPEDLFIAVM TLFGAFALMF LVHPPLALMT LAILPLIAFI VIRYGGRMTR NWQAQYGRVG AFNARIEENV GGIRVVKAFA NEAHERALFA SDNRNYRTTK LEAYRLMAGA LSINYLGLRL VQIVVLLGGA AFVVRGDLTP GGFVGFLLLV AVFYRPLEKI GAVIETYPKG IAGFRRYQDL LATEPDIADR PGAIPAPPLK GEIRFEGVRF GYSPDRPVLS AIDLTIHAGE TVAFVGPSGA GKTTLLSLIP RFYEAEAGRI TIDGHDIRDL TLASLRGQIG IVQQDVFLFA GTIRENIAYG RLRASEAEIL DAAARARLDG LIASLPEGLD TVIGERGVKL SGGQKQRLAI ARAFLKNPPI LILDEATSAL DTQTEREIQA SLFELAEGRT TLVIAHRLAT IRHADRIVVV AENGIVEQGR HDVLLAGDGY YRRLHAAQVE DSHPSRPRTA AE
|
| |