| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_2220 |
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| Symbol | |
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| ID | 7116167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | + |
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| Start bp | 2323810 |
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| End bp | 2325813 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643524970 |
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| Product | squalene-hopene cyclase |
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| Protein accession | YP_002420995 |
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| Protein GI | 218530179 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1657] Squalene cyclase |
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| TIGRFAM ID | [TIGR01507] squalene-hopene cyclase
[TIGR01787] squalene/oxidosqualene cyclases |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.96111 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGAGG CGGCCGTAAG CAAGGTCGAG ACGCTGCAGC GTCCCAAGAC CCGCGACGTG
TCCCTCGACG ACGTGGAGCG TGGCGTCCAG AGCGCCACCC GCGCCCTCAC CGAGATGACG
CAGGCGGATG GCCACATCTG CTTCGAGCTC GAGGCGGATG CGACCATCCC CTCCGAGTAC
ATCCTGTTCC ACCAGTTCCG TGGGACCGAG CCGCGGCCCG GGCTCGAGGC CAAGATCGGC
AACTACCTGC GCCGCACGCA GTCGAAGGTG CATGGCGGCT GGGCGCTGGT GCATGACGGC
CCGTTCGACA TGAGCGCGTC GGTGAAGGCC TACTTCGCCC TCAAGATGAT CGGCGACGAC
ATCGAGGCGC CGCACATGCG CGCGGTGCGC AAGGCGATCC TCCAGCGCGG GGGCGCGGCC
AACGCCAACG TCTTCACCCG CATCCTGCTC GCGCTCTACG GCGAAGTGCC GTGGGCGGCG
GTGCCGGTGA TGCCGGTGGA GGTGATGCAC CTGCCGAAGT GGTTCCCGTT CCACCTCGAC
AAGGTGTCGT ACTGGGCCCG CTGCACCATG GTGCCGCTGT TCGTGATCCA GGCCAAGAAG
CCGCGGGCGA AGAACCCGCG CGGCGTCGGC GTGGCCGAAC TGTTCGTGAC GCCGCCCGAT
TCGGTGCGGA CCTGGCCGGG CTCGCCCCAC GCCACCTGGC CGTGGACGCC GATCTTCGGC
GGCATCGACC GCGTGCTGCA GAAGACGCAG GACCACTTCC CGAAGGTGCC GCGCCAGCGC
GCCATCGACA AGGCGGTCGC CTGGGTCTCC GAGCGGCTGA ACGGCGAGGA CGGCCTCGGC
GCCATCTTCC CGGCCATGGT CAACTCGGTG CTGATGTACG AGGTGCTGGG CTATCCGCCC
GAGCACCCGC AGGTGAAGAT CGCGCTGGAA GCCATCGAGA AGCTCGTCGC CGAGAAGGAG
GACGAGGCCT ATGTCCAGCC CTGCCTGTCC CCGGTCTGGG ATACGGCGCT GAACAGCCAC
GCCATGCTCG AAGCCGGCGG GCACCAGGCG GAGGCCAATG CCCGCGCCGG CCTCGATTGG
CTCAAGCCGC TCCAGATCCT CGACATCAAG GGCGACTGGG CTGAGACCAA GCCCAACGTG
CGTCCTGGCG GCTGGGCGTT CCAGTACGCC AACCCGCACT ATCCCGACCT CGACGACACC
GCCGTCGTCG TGATGGCGAT GGATCGCGCC CAGCGTCAGC ACGGGCTGGT CAGCGGCATG
CCGGACTATT CGGAGTCGAT CGCCCGTGCC CGCGAATGGG TCGAAGGCCT TCAGAGCGCC
GATGGCGGCT GGGCGGCGTT CGATGCCGAC AACAACCACC ACTATCTCAA CCACATCCCG
TTCTCGGATC ACGGCGCCCT GCTCGATCCG CCGACCGCGG ACGTGACCGC CCGCGTCGTC
TCGATGCTGT CGCAGCTCGG CGAGACCCGC GCGACCAGCC GGGCGCTCGA CCGCGGCGTG
ACCTACCTCC TCAACGACCA GGAGAAGGAC GGGAGCTGGT ACGGCCGCTG GGGCATGAAC
TTCATCTACG GCACGTGGTC GGTGCTGTGC GCGCTCAACA CCGCCGGGGT CGATCCGCAA
TCGCCTGAGA TCCGCAAGGC GGTGGCGTGG CTCATCCGCA TCCAGAACCC GGATGGCGGC
TGGGGCGAGG ATGCCTCCTC CTACAAGCTC AACCCCGAAT TCGAGCCGGG CTACTCGACC
GCCTCGCAGA CGGCCTGGGC CCTGCTCGCG CTGATGGCGG CGGGCGAAGT CGACGATCCG
GCGGTCGCCC GCGGCGTCAA CTACCTCGTG CGCACGCAGG GGCAGGACGG GCTGTGGAGC
GAGGAGCGCT ACACCGCTAC CGGCTTCCCG CGGGTGTTCT ACCTGCGCTA CCACGGCTAC
CCGAAGTTCT TCCCGCTCTG GGCGATGGCC CGCTTCCGCA ACCTGAAGCG GGGCAACAGC
CGGCAGGTGC AGTTCGGCAT GTGA
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| Protein sequence | MREAAVSKVE TLQRPKTRDV SLDDVERGVQ SATRALTEMT QADGHICFEL EADATIPSEY
ILFHQFRGTE PRPGLEAKIG NYLRRTQSKV HGGWALVHDG PFDMSASVKA YFALKMIGDD
IEAPHMRAVR KAILQRGGAA NANVFTRILL ALYGEVPWAA VPVMPVEVMH LPKWFPFHLD
KVSYWARCTM VPLFVIQAKK PRAKNPRGVG VAELFVTPPD SVRTWPGSPH ATWPWTPIFG
GIDRVLQKTQ DHFPKVPRQR AIDKAVAWVS ERLNGEDGLG AIFPAMVNSV LMYEVLGYPP
EHPQVKIALE AIEKLVAEKE DEAYVQPCLS PVWDTALNSH AMLEAGGHQA EANARAGLDW
LKPLQILDIK GDWAETKPNV RPGGWAFQYA NPHYPDLDDT AVVVMAMDRA QRQHGLVSGM
PDYSESIARA REWVEGLQSA DGGWAAFDAD NNHHYLNHIP FSDHGALLDP PTADVTARVV
SMLSQLGETR ATSRALDRGV TYLLNDQEKD GSWYGRWGMN FIYGTWSVLC ALNTAGVDPQ
SPEIRKAVAW LIRIQNPDGG WGEDASSYKL NPEFEPGYST ASQTAWALLA LMAAGEVDDP
AVARGVNYLV RTQGQDGLWS EERYTATGFP RVFYLRYHGY PKFFPLWAMA RFRNLKRGNS
RQVQFGM
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