| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_2218 |
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| Symbol | |
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| ID | 7116165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | + |
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| Start bp | 2321613 |
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| End bp | 2322464 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643524968 |
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| Product | squalene synthase HpnD |
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| Protein accession | YP_002420993 |
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| Protein GI | 218530177 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.674273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCA CCGCCACCCC GATGCCGGGA GAGACCCCGG AAGCGGCTGC CCTGCCGGCC
GCCGGCTCGT CCTTCTACAC GGCGATGCGC CTGCTGCCGA AGGAACGGCG TGAGGCGATG
TACGCGGTCT ACGCCTTCTG CCGGGTCGTG GACGATGTCG CCGACGATGG CGGCCCGCGC
GAGGTCCGCG CGGCCGAGCT CGACCGCTGG CGGGCCGATA TCGACGCGCT CTACGCCGGC
CATCCCCCTG CGCGGGTGAA GCCGCTCGAA GAGCCGATGC GCCGCTTCGA CCTCAAGCGC
GAGGACTTCC AGGCCGTGAT CGACGGCATG GCGATGGACG CGGAGGAGGA CATCGTCGCC
CCGTCGGAAG CCAAGCTCGA CCTCTATTGC GACCGGGTCG CGAGCGCCGT CGGGCGGCTC
TCGGTGCGCA TCTTCGGCAT GCCGGAGGCG GACGGAATCC GCCTCGCGTG GCACCAGGGC
CGGGCGCTCC AGCTCACCAA CATCCTGCGT GACATCGACG AGGATGCGGA GCGCGGGCGC
CTCTACCTGC CGATGGAGAA ATTCCACAAG ATCGGGCTGA TGAACCCGAC CCCGCAGAGC
GCGCTGGCGC ATCCGCGCCT CGGCGAGGTC TGCGCGGCGG TCGCTGCCGA AGCGGAAGAG
CATTACCGCC AGACTTGGGC GATCATCGAG CGCAGCCCGC GTCGCGCCAC CAAGGCGGCC
CGCCTGATGG CGGCGGCCTA CCGGCTCTAC CTCGACGCCG TGGTCAAGCG TGGCTGGGCG
GCCCCGCGGG CGCGGGTGAA GCCGGGCAAA TTCCCCCTTC TCCTCGTCGC TTTGCGCCAC
GGGATTCTGT GA
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| Protein sequence | MSATATPMPG ETPEAAALPA AGSSFYTAMR LLPKERREAM YAVYAFCRVV DDVADDGGPR
EVRAAELDRW RADIDALYAG HPPARVKPLE EPMRRFDLKR EDFQAVIDGM AMDAEEDIVA
PSEAKLDLYC DRVASAVGRL SVRIFGMPEA DGIRLAWHQG RALQLTNILR DIDEDAERGR
LYLPMEKFHK IGLMNPTPQS ALAHPRLGEV CAAVAAEAEE HYRQTWAIIE RSPRRATKAA
RLMAAAYRLY LDAVVKRGWA APRARVKPGK FPLLLVALRH GIL
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