Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_2217 |
Symbol | |
ID | 7116164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | + |
Start bp | 2320717 |
End bp | 2321616 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643524967 |
Product | squalene synthase HpnC |
Protein accession | YP_002420992 |
Protein GI | 218530176 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | [TIGR03464] squalene synthase HpnC |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG CGCTTCAGAC CGCCAGCGAC GCCCGCACCG GCAAGGGCCA GCACGACGAG AACTTTCCCG TCGCCTCCCA CCTGATCCAC CCGCGCTACC GCGGCGCGAT CCTCGCCTTC TACAACTACG TGCGGGCCGG CGACGACGTC GCCGACCACA CCGGGCTTTC GCCCGAGCGC AAGATCGCGA TGCTCGATGC GCTCGCCGAC GCGCTCACCG GCAAGGGCGG CTCGGACCCC ACGGTCGAGC CGCTCAAGCG GGAACTCGCG GCCCATCGCC AGCCGCCGAC CCACGCGCTC GAACTGCTCG ACGCCTTCCG CATGGATGCG CGCAAGTCGC GCTACGCGGA TTGGGACGAG CTGATCCACT ATTGCCGCTA CTCGGCGATC CCGGTCGGGC GCTTCCTGCT CGACGTGCAC GGCGAGGATC CGGCGCGGGT CTACCGGACC TCCGACGCGA TCTGCGCCGC GCTGCAGGTG CTCAACCACC TTCAGGATTG CGGCAAGGAT TTTCGCGATC TCGACCGGGT CTACATCCCC CTCGACGTCA TGCGGAAGCA TGGCGCCGAC GTGTCGATGC TGGGCGCCGA CCGGGCGAGC CCGCAACTGC GCGCGGTGAT CCGCGAACTC GCCGAGCGCA CCCTGGTGCT CTTGGAGGAG GGGGCGCCGC TGCCGAACCA GATCGACGAC CTCCGCTTGA GCCTGGAGAT CGCCGCGATC CATCGCCTCG CCGTCGTCCT GACGAAGGGG CTGCTGACCC GCGATCCGCT CAGCGAGAAA GTCCATCACG GCAAGGCCGC CTTCGCGCTC ACCGCGCTCG GCGGCATCGC CGCCACGCTG GTGCGCCGCC CGTTCCGGTC GCGTGCGCCC CGTCCCGCCC CCGCCGGAGC CGGCCGATGA
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Protein sequence | MSAALQTASD ARTGKGQHDE NFPVASHLIH PRYRGAILAF YNYVRAGDDV ADHTGLSPER KIAMLDALAD ALTGKGGSDP TVEPLKRELA AHRQPPTHAL ELLDAFRMDA RKSRYADWDE LIHYCRYSAI PVGRFLLDVH GEDPARVYRT SDAICAALQV LNHLQDCGKD FRDLDRVYIP LDVMRKHGAD VSMLGADRAS PQLRAVIREL AERTLVLLEE GAPLPNQIDD LRLSLEIAAI HRLAVVLTKG LLTRDPLSEK VHHGKAAFAL TALGGIAATL VRRPFRSRAP RPAPAGAGR
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