Gene Mchl_2173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2173 
Symbol 
ID7116119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2272100 
End bp2273200 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content70% 
IMG OID643524923 
Product40-residue YVTN family beta-propeller repeat protein 
Protein accessionYP_002420948 
Protein GI218530132 
COG category[S] Function unknown 
COG ID[COG3391] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02276] 40-residue YVTN family beta-propeller repeat 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.420218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGCT CACTTCGGCT CACAGGCCGG CTCCTCCCTC TCCCCTTCGC GGGAGAGGGT 
GGCCCCCGAA GGGGGTCGGG TGAGGGGCTG GCTCCGCATT GTCCGGAAGC GTCGCTCCCC
TCTCCCGCCT CGCATCCGCG AGGCACCCTC CCCCGCAGAG GGGGGAGGGC ATTTATAGCC
CTTGCCTACC TCCTGACATC CGGCGCTCCC GCCCTGGCGC AGGAAGCCCT CGTCACGGCG
CAGCTCGGCA ACGCCGTCGA GATCATCGAC CTCGCGTCCA AGACAATCCT GCAATCGATC
CCCGTACCGG GGGCGCCGGC GGGCATCGCC GTCTCGCCCG ACCGGAAGAC GGCCTACGTC
ACCCGCCCCG AGGGCCACGG CGTCTCGGTG ATTGATCTCG ACGCGCGCCG GGTGAGCGCG
AGCCTCGATC TGCCCGGCGG CCCGCTCGGC ATCGGCGTCA ACCCGAAATC CGGCGAGGTC
TACGTCGCCG ACTGGTACGG TGCGCGCGTC TTCGTGCTGC GCCCGAATGC GGCGGGCCTG
ACGCTGGAGG GCGAGATCGC CACCGGGAAA TCTCCCTCCG GCATCGCGGT GACGCCGGAC
GGCGCCACGC TGCTGGTGGC CAACCGCGAA TCCGACTCGG TCTCGATCAT CGACGTGGGA
AACCGCCGCG AGACGCGGCG CGTATCCGTG GGCCAGCACC CGTTCGGCCT GACCCTCTCG
GCGGACGGCC GCTACGCCTA CACCGCCAAC GTGGTGTCGA ACGACGTCTC GGCCATCGAC
GTTGCCGCCG GCCGCGAGAC CGGTCGCGTC ACCACCGGCC AGCGGCCCTA CGTCATTGCG
TTCGCCGCCG GCAAAGGCTT CGTGACCGAC CAGTATTCCA ACACCGTGAC GGTGTTCGAC
CCGGCCAGCT TGAAGAAAGT GGCCGCGATC GATGTCGGCG ACCACCCCGA GGGCATCGCC
GCCACCCGCG ACGGGAAGAC GATCGTCGTC GCCAACTGGG GCGACAACGC CCTGAGCCTG
ATCGACCCGT CGAGCCTCAC GGTCACCGGC ACGATCGCGA CCGGCGACGG GCCGCGCGCC
TTCGGGGATT TCCTAAGGTA A
 
Protein sequence
MRCSLRLTGR LLPLPFAGEG GPRRGSGEGL APHCPEASLP SPASHPRGTL PRRGGRAFIA 
LAYLLTSGAP ALAQEALVTA QLGNAVEIID LASKTILQSI PVPGAPAGIA VSPDRKTAYV
TRPEGHGVSV IDLDARRVSA SLDLPGGPLG IGVNPKSGEV YVADWYGARV FVLRPNAAGL
TLEGEIATGK SPSGIAVTPD GATLLVANRE SDSVSIIDVG NRRETRRVSV GQHPFGLTLS
ADGRYAYTAN VVSNDVSAID VAAGRETGRV TTGQRPYVIA FAAGKGFVTD QYSNTVTVFD
PASLKKVAAI DVGDHPEGIA ATRDGKTIVV ANWGDNALSL IDPSSLTVTG TIATGDGPRA
FGDFLR