Gene Mchl_2084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2084 
Symbol 
ID7115868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2184764 
End bp2186017 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content68% 
IMG OID643524834 
Productdiguanylate cyclase 
Protein accessionYP_002420859 
Protein GI218530043 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000571313 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTCGACT TAAACACCCT TCAGGTCGCC AGCATCAGCA GTCGCCTTGC TTTTGTTCTG 
GTGTTCTTCG TCACCCTGCT GCGGCATCCG CGCGAGATCT ATTTCGGGGT CTGGGCCGGC
GCGCTCTGCT GCTCGCTGAT CGGGTCGTTG CTGATGCTCG GAGATCCCCC GAGCGTCCCG
CTGAATGCCG TCAAAGGGAG CATCGTCTAC ATCCTGTACG GGGCGAGCCT CGCCGTGTCC
TGGGCCGGCC TGCGCCTCTT CCATGAGCGT GCGCCCCTCA TCCCGCAGAC CCTCGGGCTC
GCCCTCCTCA GCGGCCTGTC CTACGGCATC CTGCCCCAGA TCGGGGCGTC GGTGACTTGG
GCACTGAGCG TCGTGTTCGT GTGCATCGCG CTGAGCACAG CTCTGTGTAT GTGGGAAATC
CTGAGAACAC CCGCTTCGAT GCGCCTGTGG ACACAGTACA TCGTCCTCCT GGGCTTCGGC
GGATACTTCA TCGCCTTCCT GCTGACGATC GGCGTGATCC ATTTCGCGAA CGAGCGCCTC
GCATCGCCGG AGAGCGGTAT CTACTCGCTG CTGTTCGATC TGTGGTGCGG CGTCTTCATC
CAGGTCGGCT ATCTCGCCAT GGTGAGCGAG CGCGCGCACC TGAAGCTCAG CCGCCTGGCC
GACACCGACC CCCTCACCGG ACTGGCAAAC CGGCGCGGAT TGTTCGCGGC GTTGAGCCAG
CGGGCCGGCC TGTCCCCGTC CCCGCCGCGA TGCGCGATCC TGCTGGCCGA CATCGACCAC
TTCAAGGCGA TCAACGACAC CTACGGCCAC GATGGCGGCG ACGCGGCCCT GGTCGGCTTC
GCCGAGCGAT TGCGCGGCGT GATGCGCAAG GACGACCTCG TCGCCCGCTG GGGCGGCGAG
GAGTTCCTGG TCGTGCTCGA CCAAGCCGAC GCTACCGCGG CCGCCACCGT CGCCGAGCGC
CTGCGAAAGT CCGCCGCCGG GCAGCCCTTC ACCGTGAACG GAGCGGCCGT GACCGTGACC
GCCAGCATCG GGGTCGCGGT CGTCGCCGCC GGTGAGGAGC GGATCGACGC CGCCCTGTCC
CGGGCGGACG CGGCCCTCTA CGCCGCCAAG AGAGCCGGCC GCAATCGCGT CTGTCTCGAA
CCGTCGCCGC CTCCGCCGGA CATTCGAGCC GTCCGAACGG AGCCGTCCGC CGGGCTTCGC
GAGGCCATGG AGGCCATCCA GGTTGTCGGC CAGCCGCGAT CCGAACCGGC CTGA
 
Protein sequence
MLDLNTLQVA SISSRLAFVL VFFVTLLRHP REIYFGVWAG ALCCSLIGSL LMLGDPPSVP 
LNAVKGSIVY ILYGASLAVS WAGLRLFHER APLIPQTLGL ALLSGLSYGI LPQIGASVTW
ALSVVFVCIA LSTALCMWEI LRTPASMRLW TQYIVLLGFG GYFIAFLLTI GVIHFANERL
ASPESGIYSL LFDLWCGVFI QVGYLAMVSE RAHLKLSRLA DTDPLTGLAN RRGLFAALSQ
RAGLSPSPPR CAILLADIDH FKAINDTYGH DGGDAALVGF AERLRGVMRK DDLVARWGGE
EFLVVLDQAD ATAAATVAER LRKSAAGQPF TVNGAAVTVT ASIGVAVVAA GEERIDAALS
RADAALYAAK RAGRNRVCLE PSPPPPDIRA VRTEPSAGLR EAMEAIQVVG QPRSEPA