Gene Mchl_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2079 
Symbol 
ID7115863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2178669 
End bp2179604 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content74% 
IMG OID643524829 
Productinner-membrane translocator 
Protein accessionYP_002420854 
Protein GI218530038 
COG category[R] General function prediction only 
COG ID[COG1079] Uncharacterized ABC-type transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.37561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0101179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGCTGA TCACCGGCAT CCTGTCCACG GCGCTCTTGG CGGGCGGGGT CCTCGTCCTC 
GCGGCGCTGG GCGAGGTGCT CGCCGAGCGT GTCGGCGTGG TCAATCTCGG GGTCGAGGGG
CTGATGTCCC TGGGCGCGCT CACGGGGATC GCCACCGTGG CGGCGGTGCC GAGCCCGGCC
CTCGGTTTCG CCGCGGCGCT GGGCGTCGGG TTCGCCTTCG GCTGCGTCTT TGCCGCCGCC
ACCGTTCTGC TGCGGGCCAA CCAAGTGCTG TGCGGACTCG CCCTCACGCT GCTCGGCTCC
GGGCTCGCGG CGACGCTCGG CCGCTCCTAT GCCGGCGCCC CGGCCGCCGC GGCCTTCCCG
CGGGTGAGCG TGCCGGTGCT CAGCGAGATC CCGGTGCTCG GGCCGGCCCT GTTCTCACAG
AATGTGCTGA TCTACGCGAT CTACATCGTC CTGCCGGTCG GGCTGCATCT CCTGCTGTTC
CGGACGCGGC ACGGGTTGAA CCTGCGCGCG GTCGGCGAGA ACCCAGCCGC GGCGGATGCC
GCCGGCATCC CGGTCGCGGC GATCCGGTTC TGGCACGTCG CCCTCGGGTC GAGCCTCGCC
GGCGGCGCCG GGGCCTACCT GACGCTGGCC TTCGTGCCGT CCTGGTCGGA GGGCGTGGTC
GCCGGCCGCG GCTGGATCGC CGTGGCCCTC GTCATCTTCG CCGGCTTCAG GCCGCTGACG
GCGGTGGCCG CCGCGCTGCT CTTCGGCGTC ATCACGGCGC TCGGCTTCGT CGGCCAGGCC
CGGGGCTGGC CGGTGGCGCC CGCGATCCTC TCGATGCTGC CTTATCTCGG CACCGTCGCG
TTCATCATCC TGCCGGTGGT GGCGTGGCGG CGCCTGCGCG GCTGGTTCGC GGCACCCGCC
GCGCTCGGCC TACCCTACCA TCGCGACGTG CGCTGA
 
Protein sequence
MELITGILST ALLAGGVLVL AALGEVLAER VGVVNLGVEG LMSLGALTGI ATVAAVPSPA 
LGFAAALGVG FAFGCVFAAA TVLLRANQVL CGLALTLLGS GLAATLGRSY AGAPAAAAFP
RVSVPVLSEI PVLGPALFSQ NVLIYAIYIV LPVGLHLLLF RTRHGLNLRA VGENPAAADA
AGIPVAAIRF WHVALGSSLA GGAGAYLTLA FVPSWSEGVV AGRGWIAVAL VIFAGFRPLT
AVAAALLFGV ITALGFVGQA RGWPVAPAIL SMLPYLGTVA FIILPVVAWR RLRGWFAAPA
ALGLPYHRDV R